Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MT-ND3P03897 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
MT-ND3P03897 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.69■□□□□ 0.26
MT-ND3P03897 AP005117.1-202ENST00000581724 1908 ntBASIC16.69■□□□□ 0.26
MT-ND3P03897 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
MT-ND3P03897 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MT-ND3P03897 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MT-ND3P03897 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MT-ND3P03897 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MT-ND3P03897 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.69■□□□□ 0.26
MT-ND3P03897 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.69■□□□□ 0.26
MT-ND3P03897 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.69■□□□□ 0.26
MT-ND3P03897 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.69■□□□□ 0.26
MT-ND3P03897 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.69■□□□□ 0.26
MT-ND3P03897 AC012640.2-201ENST00000561606 901 ntBASIC16.69■□□□□ 0.26
MT-ND3P03897 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.69■□□□□ 0.26
MT-ND3P03897 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.69■□□□□ 0.26
MT-ND3P03897 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
MT-ND3P03897 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
MT-ND3P03897 AC005593.1-201ENST00000624894 515 ntBASIC16.69■□□□□ 0.26
MT-ND3P03897 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
MT-ND3P03897 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MT-ND3P03897 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
MT-ND3P03897 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.69■□□□□ 0.26
MT-ND3P03897 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
MT-ND3P03897 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
MT-ND3P03897 REXO1L8P-201ENST00000604378 1897 ntBASIC16.69■□□□□ 0.26
MT-ND3P03897 PCGF3-213ENST00000620529 1899 ntBASIC16.69■□□□□ 0.26
MT-ND3P03897 AC126755.1-201ENST00000525846 6405 ntBASIC16.69■□□□□ 0.26
MT-ND3P03897 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
MT-ND3P03897 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MT-ND3P03897 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MT-ND3P03897 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
MT-ND3P03897 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
MT-ND3P03897 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
MT-ND3P03897 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.68■□□□□ 0.26
MT-ND3P03897 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MT-ND3P03897 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MT-ND3P03897 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MT-ND3P03897 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MT-ND3P03897 AL513477.1-201ENST00000602865 2407 ntBASIC16.68■□□□□ 0.26
MT-ND3P03897 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.68■□□□□ 0.26
MT-ND3P03897 LINC01144-201ENST00000626198 1710 ntBASIC16.68■□□□□ 0.26
MT-ND3P03897 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MT-ND3P03897 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MT-ND3P03897 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
MT-ND3P03897 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MT-ND3P03897 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MT-ND3P03897 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MT-ND3P03897 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MT-ND3P03897 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MT-ND3P03897 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.68■□□□□ 0.26
MT-ND3P03897 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MT-ND3P03897 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
MT-ND3P03897 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.68■□□□□ 0.26
MT-ND3P03897 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.68■□□□□ 0.26
MT-ND3P03897 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
MT-ND3P03897 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.68■□□□□ 0.26
MT-ND3P03897 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MT-ND3P03897 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.68■□□□□ 0.26
MT-ND3P03897 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MT-ND3P03897 AC034105.1-201ENST00000563488 319 ntBASIC16.68■□□□□ 0.26
MT-ND3P03897 AC140113.2-201ENST00000604370 208 ntBASIC16.68■□□□□ 0.26
MT-ND3P03897 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.68■□□□□ 0.26
MT-ND3P03897 AL589182.2-201ENST00000619332 1049 ntBASIC16.68■□□□□ 0.26
MT-ND3P03897 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.68■□□□□ 0.26
MT-ND3P03897 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MT-ND3P03897 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
MT-ND3P03897 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
MT-ND3P03897 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MT-ND3P03897 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.68■□□□□ 0.26
MT-ND3P03897 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
MT-ND3P03897 NCF1C-201ENST00000438382 1427 ntBASIC16.68■□□□□ 0.26
MT-ND3P03897 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
MT-ND3P03897 AC144831.1-201ENST00000573312 2656 ntBASIC16.68■□□□□ 0.26
MT-ND3P03897 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MT-ND3P03897 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MT-ND3P03897 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MT-ND3P03897 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
MT-ND3P03897 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MT-ND3P03897 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MT-ND3P03897 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
MT-ND3P03897 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MT-ND3P03897 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MT-ND3P03897 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MT-ND3P03897 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.67■□□□□ 0.26
MT-ND3P03897 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
MT-ND3P03897 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.67■□□□□ 0.26
MT-ND3P03897 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
MT-ND3P03897 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MT-ND3P03897 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MT-ND3P03897 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MT-ND3P03897 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
MT-ND3P03897 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MT-ND3P03897 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.67■□□□□ 0.26
MT-ND3P03897 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.67■□□□□ 0.26
MT-ND3P03897 RNA5SP416-201ENST00000516838 111 ntBASIC16.67■□□□□ 0.26
MT-ND3P03897 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.67■□□□□ 0.26
MT-ND3P03897 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.67■□□□□ 0.26
MT-ND3P03897 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms