Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.46■□□□□ 0.07
MT-ND1P03886 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
MT-ND1P03886 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
MT-ND1P03886 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ND1P03886 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.46■□□□□ 0.07
MT-ND1P03886 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
MT-ND1P03886 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.46■□□□□ 0.07
MT-ND1P03886 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.46■□□□□ 0.06
MT-ND1P03886 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
MT-ND1P03886 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
MT-ND1P03886 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.46■□□□□ 0.06
MT-ND1P03886 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND1P03886 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.45■□□□□ 0.06
MT-ND1P03886 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND1P03886 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.45■□□□□ 0.06
MT-ND1P03886 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND1P03886 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND1P03886 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND1P03886 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.45■□□□□ 0.06
MT-ND1P03886 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND1P03886 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.45■□□□□ 0.06
MT-ND1P03886 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND1P03886 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND1P03886 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND1P03886 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.45■□□□□ 0.06
MT-ND1P03886 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.45■□□□□ 0.06
MT-ND1P03886 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND1P03886 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND1P03886 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND1P03886 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND1P03886 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND1P03886 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND1P03886 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.45■□□□□ 0.06
MT-ND1P03886 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND1P03886 NT5C-211ENST00000582170 653 ntTSL 3 BASIC15.45■□□□□ 0.06
MT-ND1P03886 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.45■□□□□ 0.06
MT-ND1P03886 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.45■□□□□ 0.06
MT-ND1P03886 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
MT-ND1P03886 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.45■□□□□ 0.06
MT-ND1P03886 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.45■□□□□ 0.06
MT-ND1P03886 AC068587.6-202ENST00000641839 5619 ntBASIC15.45■□□□□ 0.06
MT-ND1P03886 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND1P03886 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND1P03886 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND1P03886 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND1P03886 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.45■□□□□ 0.06
MT-ND1P03886 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
MT-ND1P03886 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.45■□□□□ 0.06
MT-ND1P03886 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND1P03886 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND1P03886 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND1P03886 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND1P03886 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND1P03886 SSR4P1-203ENST00000599569 2260 ntBASIC15.45■□□□□ 0.06
MT-ND1P03886 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
MT-ND1P03886 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.44■□□□□ 0.06
MT-ND1P03886 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.44■□□□□ 0.06
MT-ND1P03886 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
MT-ND1P03886 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
MT-ND1P03886 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MT-ND1P03886 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
MT-ND1P03886 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MT-ND1P03886 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
MT-ND1P03886 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MT-ND1P03886 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MT-ND1P03886 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MT-ND1P03886 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.44■□□□□ 0.06
MT-ND1P03886 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
MT-ND1P03886 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MT-ND1P03886 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.44■□□□□ 0.06
MT-ND1P03886 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MT-ND1P03886 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
MT-ND1P03886 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
MT-ND1P03886 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.44■□□□□ 0.06
MT-ND1P03886 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.44■□□□□ 0.06
MT-ND1P03886 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.44■□□□□ 0.06
MT-ND1P03886 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.44■□□□□ 0.06
MT-ND1P03886 BX005266.1-201ENST00000473402 457 ntBASIC15.44■□□□□ 0.06
MT-ND1P03886 FOSL1P1-201ENST00000511041 816 ntBASIC15.44■□□□□ 0.06
MT-ND1P03886 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.44■□□□□ 0.06
MT-ND1P03886 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.44■□□□□ 0.06
MT-ND1P03886 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.44■□□□□ 0.06
MT-ND1P03886 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.44■□□□□ 0.06
MT-ND1P03886 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MT-ND1P03886 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.44■□□□□ 0.06
MT-ND1P03886 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
MT-ND1P03886 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MT-ND1P03886 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.44■□□□□ 0.06
MT-ND1P03886 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
MT-ND1P03886 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.44■□□□□ 0.06
MT-ND1P03886 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.44■□□□□ 0.06
MT-ND1P03886 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
MT-ND1P03886 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
MT-ND1P03886 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
MT-ND1P03886 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
MT-ND1P03886 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.44■□□□□ 0.06
MT-ND1P03886 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
MT-ND1P03886 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
MT-ND1P03886 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
MT-ND1P03886 NCF1C-201ENST00000438382 1427 ntBASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms