Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.5□□□□□ -0.09
APOC1P02654 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
APOC1P02654 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.49□□□□□ -0.09
APOC1P02654 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOC1P02654 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOC1P02654 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.49□□□□□ -0.09
APOC1P02654 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.49□□□□□ -0.09
APOC1P02654 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOC1P02654 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
APOC1P02654 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
APOC1P02654 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
APOC1P02654 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
APOC1P02654 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
APOC1P02654 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.49□□□□□ -0.09
APOC1P02654 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOC1P02654 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.49□□□□□ -0.09
APOC1P02654 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOC1P02654 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.49□□□□□ -0.09
APOC1P02654 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOC1P02654 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOC1P02654 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.49□□□□□ -0.09
APOC1P02654 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOC1P02654 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
APOC1P02654 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOC1P02654 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOC1P02654 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
APOC1P02654 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOC1P02654 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
APOC1P02654 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.49□□□□□ -0.09
APOC1P02654 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOC1P02654 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOC1P02654 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.49□□□□□ -0.09
APOC1P02654 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.49□□□□□ -0.09
APOC1P02654 FAM185BP-201ENST00000443595 716 ntBASIC14.49□□□□□ -0.09
APOC1P02654 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.49□□□□□ -0.09
APOC1P02654 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.49□□□□□ -0.09
APOC1P02654 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.49□□□□□ -0.09
APOC1P02654 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.49□□□□□ -0.09
APOC1P02654 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
APOC1P02654 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.49□□□□□ -0.09
APOC1P02654 MIR3909-201ENST00000579518 119 ntBASIC14.49□□□□□ -0.09
APOC1P02654 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.49□□□□□ -0.09
APOC1P02654 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.49□□□□□ -0.09
APOC1P02654 AC004790.2-201ENST00000623588 572 ntBASIC14.49□□□□□ -0.09
APOC1P02654 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.49□□□□□ -0.09
APOC1P02654 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
APOC1P02654 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.49□□□□□ -0.09
APOC1P02654 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.49□□□□□ -0.09
APOC1P02654 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
APOC1P02654 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.49□□□□□ -0.09
APOC1P02654 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.49□□□□□ -0.09
APOC1P02654 AP002414.3-201ENST00000589352 1468 ntBASIC14.49□□□□□ -0.09
APOC1P02654 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
APOC1P02654 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOC1P02654 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
APOC1P02654 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOC1P02654 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.49□□□□□ -0.09
APOC1P02654 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
APOC1P02654 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOC1P02654 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.49□□□□□ -0.09
APOC1P02654 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOC1P02654 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
APOC1P02654 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
APOC1P02654 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
APOC1P02654 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOC1P02654 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
APOC1P02654 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.48□□□□□ -0.09
APOC1P02654 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOC1P02654 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
APOC1P02654 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
APOC1P02654 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.48□□□□□ -0.09
APOC1P02654 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOC1P02654 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
APOC1P02654 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOC1P02654 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOC1P02654 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOC1P02654 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.48□□□□□ -0.09
APOC1P02654 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOC1P02654 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOC1P02654 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOC1P02654 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.48□□□□□ -0.09
APOC1P02654 PMS2P4-201ENST00000412466 1052 ntBASIC14.48□□□□□ -0.09
APOC1P02654 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
APOC1P02654 HNRNPDP1-201ENST00000439535 754 ntBASIC14.48□□□□□ -0.09
APOC1P02654 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOC1P02654 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.48□□□□□ -0.09
APOC1P02654 CXCL1P1-201ENST00000502804 216 ntBASIC14.48□□□□□ -0.09
APOC1P02654 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.48□□□□□ -0.09
APOC1P02654 FAM215A-202ENST00000632077 792 ntBASIC14.48□□□□□ -0.09
APOC1P02654 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.48□□□□□ -0.09
APOC1P02654 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
APOC1P02654 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
APOC1P02654 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOC1P02654 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
APOC1P02654 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOC1P02654 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOC1P02654 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
APOC1P02654 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
APOC1P02654 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.48□□□□□ -0.09
APOC1P02654 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms