Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CPNE6O95741 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE6O95741 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE6O95741 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE6O95741 HYMAI-201ENST00000635591 3347 ntBASIC16.03■□□□□ 0.16
CPNE6O95741 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE6O95741 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE6O95741 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.03■□□□□ 0.16
CPNE6O95741 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE6O95741 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE6O95741 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CPNE6O95741 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.03■□□□□ 0.16
CPNE6O95741 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE6O95741 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.03■□□□□ 0.16
CPNE6O95741 TREML5P-201ENST00000421694 576 ntBASIC16.03■□□□□ 0.16
CPNE6O95741 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.03■□□□□ 0.16
CPNE6O95741 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE6O95741 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.03■□□□□ 0.16
CPNE6O95741 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.03■□□□□ 0.16
CPNE6O95741 LINC00895-201ENST00000629028 1637 ntBASIC16.03■□□□□ 0.16
CPNE6O95741 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE6O95741 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.03■□□□□ 0.16
CPNE6O95741 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE6O95741 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE6O95741 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE6O95741 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE6O95741 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.03■□□□□ 0.16
CPNE6O95741 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE6O95741 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE6O95741 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE6O95741 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE6O95741 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE6O95741 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.02■□□□□ 0.16
CPNE6O95741 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE6O95741 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE6O95741 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE6O95741 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.02■□□□□ 0.16
CPNE6O95741 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CPNE6O95741 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.02■□□□□ 0.16
CPNE6O95741 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.02■□□□□ 0.16
CPNE6O95741 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.02■□□□□ 0.16
CPNE6O95741 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CPNE6O95741 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CPNE6O95741 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
CPNE6O95741 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE6O95741 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.16
CPNE6O95741 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.02■□□□□ 0.16
CPNE6O95741 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE6O95741 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE6O95741 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE6O95741 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE6O95741 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.02■□□□□ 0.16
CPNE6O95741 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE6O95741 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.02■□□□□ 0.16
CPNE6O95741 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CPNE6O95741 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE6O95741 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.02■□□□□ 0.16
CPNE6O95741 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.02■□□□□ 0.16
CPNE6O95741 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.02■□□□□ 0.16
CPNE6O95741 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE6O95741 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.02■□□□□ 0.16
CPNE6O95741 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.02■□□□□ 0.16
CPNE6O95741 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE6O95741 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.02■□□□□ 0.16
CPNE6O95741 AL138918.1-201ENST00000568306 659 ntBASIC16.02■□□□□ 0.16
CPNE6O95741 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.02■□□□□ 0.16
CPNE6O95741 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE6O95741 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE6O95741 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.02■□□□□ 0.16
CPNE6O95741 AL390754.1-201ENST00000619088 582 ntBASIC16.02■□□□□ 0.16
CPNE6O95741 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.02■□□□□ 0.16
CPNE6O95741 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.02■□□□□ 0.16
CPNE6O95741 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CPNE6O95741 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CPNE6O95741 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CPNE6O95741 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CPNE6O95741 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.02■□□□□ 0.15
CPNE6O95741 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CPNE6O95741 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CPNE6O95741 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.02■□□□□ 0.15
CPNE6O95741 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CPNE6O95741 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
CPNE6O95741 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CPNE6O95741 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CPNE6O95741 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.02■□□□□ 0.15
CPNE6O95741 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CPNE6O95741 AC068418.2-201ENST00000577309 3703 ntBASIC16.02■□□□□ 0.15
CPNE6O95741 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
CPNE6O95741 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE6O95741 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.01■□□□□ 0.15
CPNE6O95741 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE6O95741 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE6O95741 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CPNE6O95741 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.01■□□□□ 0.15
CPNE6O95741 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.01■□□□□ 0.15
CPNE6O95741 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CPNE6O95741 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.01■□□□□ 0.15
CPNE6O95741 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CPNE6O95741 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.01■□□□□ 0.15
CPNE6O95741 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms