Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 AC116353.5-201ENST00000638148 1699 ntBASIC17.49■□□□□ 0.39
CSPG5O95196 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSPG5O95196 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSPG5O95196 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
CSPG5O95196 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CSPG5O95196 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CSPG5O95196 AC087499.6-201ENST00000411576 835 ntBASIC17.49■□□□□ 0.39
CSPG5O95196 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC17.49■□□□□ 0.39
CSPG5O95196 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CSPG5O95196 AL589987.1-201ENST00000453380 819 ntBASIC17.49■□□□□ 0.39
CSPG5O95196 RN7SL837P-201ENST00000463010 287 ntBASIC17.49■□□□□ 0.39
CSPG5O95196 AC092552.1-201ENST00000547243 906 ntBASIC17.49■□□□□ 0.39
CSPG5O95196 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17.49■□□□□ 0.39
CSPG5O95196 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CSPG5O95196 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
CSPG5O95196 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.49■□□□□ 0.39
CSPG5O95196 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSPG5O95196 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.49■□□□□ 0.39
CSPG5O95196 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSPG5O95196 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSPG5O95196 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.49■□□□□ 0.39
CSPG5O95196 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CSPG5O95196 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CSPG5O95196 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC17.49■□□□□ 0.39
CSPG5O95196 AD000864.1-201ENST00000624076 2295 ntBASIC17.49■□□□□ 0.39
CSPG5O95196 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CSPG5O95196 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSPG5O95196 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CSPG5O95196 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CSPG5O95196 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSPG5O95196 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSPG5O95196 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CSPG5O95196 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
CSPG5O95196 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSPG5O95196 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSPG5O95196 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CSPG5O95196 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSPG5O95196 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSPG5O95196 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CSPG5O95196 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.48■□□□□ 0.39
CSPG5O95196 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.48■□□□□ 0.39
CSPG5O95196 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.48■□□□□ 0.39
CSPG5O95196 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSPG5O95196 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CSPG5O95196 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC17.48■□□□□ 0.39
CSPG5O95196 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.48■□□□□ 0.39
CSPG5O95196 AC098859.1-201ENST00000502915 1238 ntBASIC17.48■□□□□ 0.39
CSPG5O95196 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.48■□□□□ 0.39
CSPG5O95196 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC17.48■□□□□ 0.39
CSPG5O95196 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
CSPG5O95196 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.48■□□□□ 0.39
CSPG5O95196 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CSPG5O95196 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.48■□□□□ 0.39
CSPG5O95196 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.48■□□□□ 0.39
CSPG5O95196 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CSPG5O95196 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSPG5O95196 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CSPG5O95196 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSPG5O95196 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSPG5O95196 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CSPG5O95196 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSPG5O95196 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.48■□□□□ 0.39
CSPG5O95196 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.48■□□□□ 0.39
CSPG5O95196 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.48■□□□□ 0.39
CSPG5O95196 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSPG5O95196 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSPG5O95196 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CSPG5O95196 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSPG5O95196 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSPG5O95196 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CSPG5O95196 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSPG5O95196 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CSPG5O95196 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CSPG5O95196 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSPG5O95196 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSPG5O95196 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSPG5O95196 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC17.47■□□□□ 0.39
CSPG5O95196 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSPG5O95196 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CSPG5O95196 TPRX2P-201ENST00000535362 881 ntBASIC17.47■□□□□ 0.39
CSPG5O95196 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSPG5O95196 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSPG5O95196 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CSPG5O95196 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSPG5O95196 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.47■□□□□ 0.39
CSPG5O95196 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSPG5O95196 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSPG5O95196 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSPG5O95196 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.47■□□□□ 0.39
CSPG5O95196 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSPG5O95196 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CSPG5O95196 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSPG5O95196 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CSPG5O95196 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.47■□□□□ 0.39
CSPG5O95196 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSPG5O95196 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSPG5O95196 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.47■□□□□ 0.39
CSPG5O95196 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSPG5O95196 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.47■□□□□ 0.39
CSPG5O95196 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms