Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CTNSO60931 AC109322.1-201ENST00000524499 1264 ntBASIC15.27■□□□□ 0.04
CTNSO60931 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CTNSO60931 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.27■□□□□ 0.04
CTNSO60931 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.27■□□□□ 0.04
CTNSO60931 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.27■□□□□ 0.04
CTNSO60931 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTNSO60931 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CTNSO60931 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CTNSO60931 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
CTNSO60931 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTNSO60931 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CTNSO60931 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTNSO60931 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CTNSO60931 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CTNSO60931 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTNSO60931 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CTNSO60931 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTNSO60931 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CTNSO60931 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.27■□□□□ 0.03
CTNSO60931 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTNSO60931 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CTNSO60931 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CTNSO60931 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.26■□□□□ 0.03
CTNSO60931 CYP2T1P-202ENST00000641596 2535 ntBASIC15.26■□□□□ 0.03
CTNSO60931 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTNSO60931 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.26■□□□□ 0.03
CTNSO60931 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTNSO60931 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
CTNSO60931 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.26■□□□□ 0.03
CTNSO60931 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CTNSO60931 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.26■□□□□ 0.03
CTNSO60931 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CTNSO60931 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTNSO60931 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CTNSO60931 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CTNSO60931 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTNSO60931 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTNSO60931 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTNSO60931 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTNSO60931 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.26■□□□□ 0.03
CTNSO60931 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTNSO60931 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CTNSO60931 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
CTNSO60931 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTNSO60931 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CTNSO60931 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTNSO60931 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.26■□□□□ 0.03
CTNSO60931 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.26■□□□□ 0.03
CTNSO60931 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.26■□□□□ 0.03
CTNSO60931 AC245100.5-201ENST00000452108 331 ntBASIC15.26■□□□□ 0.03
CTNSO60931 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CTNSO60931 AC092183.1-201ENST00000469884 875 ntBASIC15.26■□□□□ 0.03
CTNSO60931 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.26■□□□□ 0.03
CTNSO60931 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.26■□□□□ 0.03
CTNSO60931 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.26■□□□□ 0.03
CTNSO60931 AC069262.1-201ENST00000539058 672 ntBASIC15.26■□□□□ 0.03
CTNSO60931 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CTNSO60931 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTNSO60931 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.26■□□□□ 0.03
CTNSO60931 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.26■□□□□ 0.03
CTNSO60931 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.26■□□□□ 0.03
CTNSO60931 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.26■□□□□ 0.03
CTNSO60931 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.26■□□□□ 0.03
CTNSO60931 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CTNSO60931 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CTNSO60931 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.26■□□□□ 0.03
CTNSO60931 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTNSO60931 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTNSO60931 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
CTNSO60931 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTNSO60931 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.25■□□□□ 0.03
CTNSO60931 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CTNSO60931 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTNSO60931 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTNSO60931 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.25■□□□□ 0.03
CTNSO60931 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CTNSO60931 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.25■□□□□ 0.03
CTNSO60931 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.25■□□□□ 0.03
CTNSO60931 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTNSO60931 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.25■□□□□ 0.03
CTNSO60931 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CTNSO60931 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTNSO60931 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTNSO60931 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.25■□□□□ 0.03
CTNSO60931 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CTNSO60931 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.25■□□□□ 0.03
CTNSO60931 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTNSO60931 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
CTNSO60931 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.25■□□□□ 0.03
CTNSO60931 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.25■□□□□ 0.03
CTNSO60931 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.25■□□□□ 0.03
CTNSO60931 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.25■□□□□ 0.03
CTNSO60931 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTNSO60931 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.25■□□□□ 0.03
CTNSO60931 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.25■□□□□ 0.03
CTNSO60931 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.25■□□□□ 0.03
CTNSO60931 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTNSO60931 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CTNSO60931 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms