Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.6■□□□□ 0.09
LCMT2O60294 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
LCMT2O60294 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LCMT2O60294 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LCMT2O60294 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
LCMT2O60294 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.6■□□□□ 0.09
LCMT2O60294 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LCMT2O60294 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LCMT2O60294 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.59■□□□□ 0.09
LCMT2O60294 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
LCMT2O60294 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.59■□□□□ 0.09
LCMT2O60294 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LCMT2O60294 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LCMT2O60294 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LCMT2O60294 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
LCMT2O60294 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
LCMT2O60294 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LCMT2O60294 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LCMT2O60294 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.59■□□□□ 0.09
LCMT2O60294 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
LCMT2O60294 FAM220BP-201ENST00000377689 816 ntBASIC15.59■□□□□ 0.09
LCMT2O60294 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LCMT2O60294 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
LCMT2O60294 ALG1L8P-201ENST00000533887 760 ntBASIC15.59■□□□□ 0.09
LCMT2O60294 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.59■□□□□ 0.09
LCMT2O60294 AC061975.2-201ENST00000581722 295 ntBASIC15.59■□□□□ 0.09
LCMT2O60294 GPALPP1-207ENST00000611650 899 ntBASIC15.59■□□□□ 0.09
LCMT2O60294 AC009093.7-201ENST00000623853 1223 ntBASIC15.59■□□□□ 0.09
LCMT2O60294 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.59■□□□□ 0.09
LCMT2O60294 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
LCMT2O60294 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LCMT2O60294 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
LCMT2O60294 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LCMT2O60294 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
LCMT2O60294 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LCMT2O60294 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.59■□□□□ 0.09
LCMT2O60294 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
LCMT2O60294 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.59■□□□□ 0.09
LCMT2O60294 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
LCMT2O60294 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.58■□□□□ 0.09
LCMT2O60294 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LCMT2O60294 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LCMT2O60294 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.58■□□□□ 0.08
LCMT2O60294 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.58■□□□□ 0.08
LCMT2O60294 CROCCP1-201ENST00000426910 5675 ntBASIC15.58■□□□□ 0.08
LCMT2O60294 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
LCMT2O60294 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LCMT2O60294 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LCMT2O60294 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
LCMT2O60294 AL139400.1-201ENST00000366220 510 ntBASIC15.58■□□□□ 0.08
LCMT2O60294 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.58■□□□□ 0.08
LCMT2O60294 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
LCMT2O60294 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.58■□□□□ 0.08
LCMT2O60294 RNA5SP410-201ENST00000516285 106 ntBASIC15.58■□□□□ 0.08
LCMT2O60294 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.58■□□□□ 0.08
LCMT2O60294 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.58■□□□□ 0.08
LCMT2O60294 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
LCMT2O60294 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.58■□□□□ 0.08
LCMT2O60294 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.58■□□□□ 0.08
LCMT2O60294 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.58■□□□□ 0.08
LCMT2O60294 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.58■□□□□ 0.08
LCMT2O60294 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LCMT2O60294 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LCMT2O60294 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.58■□□□□ 0.08
LCMT2O60294 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.08
LCMT2O60294 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LCMT2O60294 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LCMT2O60294 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.57■□□□□ 0.08
LCMT2O60294 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LCMT2O60294 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LCMT2O60294 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
LCMT2O60294 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.57■□□□□ 0.08
LCMT2O60294 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.57■□□□□ 0.08
LCMT2O60294 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
LCMT2O60294 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LCMT2O60294 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
LCMT2O60294 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LCMT2O60294 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
LCMT2O60294 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LCMT2O60294 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LCMT2O60294 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LCMT2O60294 AC026691.1-201ENST00000602502 2017 ntBASIC15.57■□□□□ 0.08
LCMT2O60294 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
LCMT2O60294 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LCMT2O60294 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
LCMT2O60294 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.57■□□□□ 0.08
LCMT2O60294 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.57■□□□□ 0.08
LCMT2O60294 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.57■□□□□ 0.08
LCMT2O60294 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.57■□□□□ 0.08
LCMT2O60294 RARRES2P9-201ENST00000565168 469 ntBASIC15.57■□□□□ 0.08
LCMT2O60294 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LCMT2O60294 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.57■□□□□ 0.08
LCMT2O60294 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.57■□□□□ 0.08
LCMT2O60294 MIR4321-201ENST00000592276 80 ntBASIC15.57■□□□□ 0.08
LCMT2O60294 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LCMT2O60294 AL365330.1-201ENST00000607459 531 ntBASIC15.57■□□□□ 0.08
LCMT2O60294 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
LCMT2O60294 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LCMT2O60294 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
LCMT2O60294 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms