Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF13O43567 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF13O43567 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RNF13O43567 AC023824.1-201ENST00000562945 2975 ntBASIC14.91□□□□□ -0.02
RNF13O43567 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.91□□□□□ -0.02
RNF13O43567 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF13O43567 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RNF13O43567 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.91□□□□□ -0.02
RNF13O43567 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.9□□□□□ -0.02
RNF13O43567 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF13O43567 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RNF13O43567 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RNF13O43567 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RNF13O43567 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF13O43567 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF13O43567 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RNF13O43567 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.9□□□□□ -0.02
RNF13O43567 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.9□□□□□ -0.02
RNF13O43567 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF13O43567 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RNF13O43567 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF13O43567 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RNF13O43567 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RNF13O43567 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF13O43567 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF13O43567 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF13O43567 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF13O43567 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF13O43567 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
RNF13O43567 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.9□□□□□ -0.02
RNF13O43567 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.9□□□□□ -0.02
RNF13O43567 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF13O43567 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RNF13O43567 AC079776.4-201ENST00000511039 504 ntBASIC14.9□□□□□ -0.02
RNF13O43567 IGHV3-22-201ENST00000520721 359 ntBASIC14.9□□□□□ -0.02
RNF13O43567 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.9□□□□□ -0.02
RNF13O43567 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.9□□□□□ -0.02
RNF13O43567 AC020765.3-201ENST00000613051 740 ntBASIC14.9□□□□□ -0.02
RNF13O43567 AL645728.2-201ENST00000641974 660 ntBASIC14.9□□□□□ -0.02
RNF13O43567 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RNF13O43567 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RNF13O43567 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF13O43567 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
RNF13O43567 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.9□□□□□ -0.02
RNF13O43567 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.9□□□□□ -0.02
RNF13O43567 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF13O43567 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RNF13O43567 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.9□□□□□ -0.02
RNF13O43567 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.9□□□□□ -0.02
RNF13O43567 HLA-A-201ENST00000376802 1334 ntBASIC14.9□□□□□ -0.02
RNF13O43567 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RNF13O43567 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF13O43567 AC010491.1-201ENST00000563101 2797 ntBASIC14.9□□□□□ -0.02
RNF13O43567 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF13O43567 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RNF13O43567 NORAD-201ENST00000565493 5339 ntBASIC14.9□□□□□ -0.02
RNF13O43567 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.9□□□□□ -0.02
RNF13O43567 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
RNF13O43567 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF13O43567 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RNF13O43567 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.89□□□□□ -0.03
RNF13O43567 DBET-201ENST00000630918 3363 ntBASIC14.89□□□□□ -0.03
RNF13O43567 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF13O43567 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.89□□□□□ -0.03
RNF13O43567 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF13O43567 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF13O43567 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RNF13O43567 AC144831.1-201ENST00000573312 2656 ntBASIC14.89□□□□□ -0.03
RNF13O43567 AC092850.2-201ENST00000623821 2697 ntBASIC14.89□□□□□ -0.03
RNF13O43567 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RNF13O43567 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF13O43567 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF13O43567 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.89□□□□□ -0.03
RNF13O43567 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RNF13O43567 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.89□□□□□ -0.03
RNF13O43567 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.89□□□□□ -0.03
RNF13O43567 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.89□□□□□ -0.03
RNF13O43567 AL031432.2-201ENST00000566714 459 ntBASIC14.89□□□□□ -0.03
RNF13O43567 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
RNF13O43567 AL928711.1-201ENST00000570165 459 ntBASIC14.89□□□□□ -0.03
RNF13O43567 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF13O43567 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.89□□□□□ -0.03
RNF13O43567 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.89□□□□□ -0.03
RNF13O43567 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.89□□□□□ -0.03
RNF13O43567 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF13O43567 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF13O43567 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF13O43567 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF13O43567 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RNF13O43567 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
RNF13O43567 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RNF13O43567 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RNF13O43567 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF13O43567 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF13O43567 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RNF13O43567 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF13O43567 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF13O43567 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RNF13O43567 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
RNF13O43567 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms