Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TO15178 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TO15178 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.03■□□□□ -0
TO15178 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TO15178 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
TO15178 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.03■□□□□ -0
TO15178 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TO15178 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TO15178 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TO15178 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.03■□□□□ -0
TO15178 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TO15178 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
TO15178 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
TO15178 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.03■□□□□ -0
TO15178 HLA-J-203ENST00000494367 1087 ntBASIC15.03■□□□□ -0
TO15178 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.03■□□□□ -0
TO15178 AL512356.2-201ENST00000546955 174 ntBASIC15.03■□□□□ -0
TO15178 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
TO15178 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.03■□□□□ -0
TO15178 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TO15178 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
TO15178 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
TO15178 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TO15178 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.03■□□□□ -0
TO15178 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TO15178 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TO15178 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TO15178 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TO15178 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TO15178 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TO15178 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TO15178 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TO15178 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.03■□□□□ -0
TO15178 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
TO15178 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.03■□□□□ -0
TO15178 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
TO15178 AL136379.1-201ENST00000623471 2642 ntBASIC15.03■□□□□ -0
TO15178 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TO15178 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.03■□□□□ -0
TO15178 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TO15178 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.03■□□□□ -0
TO15178 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.03■□□□□ -0
TO15178 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TO15178 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.02■□□□□ -0
TO15178 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TO15178 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
TO15178 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.02■□□□□ -0
TO15178 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
TO15178 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.02■□□□□ -0
TO15178 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TO15178 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.02■□□□□ -0
TO15178 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TO15178 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
TO15178 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.02■□□□□ -0
TO15178 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.02■□□□□ -0
TO15178 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.02■□□□□ -0
TO15178 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
TO15178 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.02■□□□□ -0
TO15178 RBPMS2P1-201ENST00000437762 623 ntBASIC15.02■□□□□ -0
TO15178 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.02■□□□□ -0
TO15178 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
TO15178 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.02■□□□□ -0
TO15178 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.02■□□□□ -0
TO15178 AP001059.3-201ENST00000619053 235 ntBASIC15.02■□□□□ -0
TO15178 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.02□□□□□ -0.01
TO15178 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TO15178 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.02□□□□□ -0.01
TO15178 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TO15178 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.02□□□□□ -0.01
TO15178 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.02□□□□□ -0.01
TO15178 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.02□□□□□ -0.01
TO15178 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TO15178 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TO15178 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TO15178 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TO15178 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
TO15178 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TO15178 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TO15178 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
TO15178 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.02□□□□□ -0.01
TO15178 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TO15178 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TO15178 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TO15178 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
TO15178 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TO15178 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.01□□□□□ -0.01
TO15178 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TO15178 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.01□□□□□ -0.01
TO15178 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TO15178 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TO15178 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TO15178 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TO15178 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.01□□□□□ -0.01
TO15178 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TO15178 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
TO15178 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.01□□□□□ -0.01
TO15178 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TO15178 PCDHB19P-201ENST00000570871 2371 ntBASIC15.01□□□□□ -0.01
TO15178 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TO15178 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms