Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM38O00635 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM38O00635 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
TRIM38O00635 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
TRIM38O00635 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM38O00635 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM38O00635 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM38O00635 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.45■□□□□ 0.22
TRIM38O00635 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.44■□□□□ 0.22
TRIM38O00635 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM38O00635 MST1L-201ENST00000442552 2185 ntBASIC16.44■□□□□ 0.22
TRIM38O00635 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM38O00635 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM38O00635 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.44■□□□□ 0.22
TRIM38O00635 HLA-A-202ENST00000376806 1854 ntBASIC16.44■□□□□ 0.22
TRIM38O00635 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.44■□□□□ 0.22
TRIM38O00635 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.44■□□□□ 0.22
TRIM38O00635 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM38O00635 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM38O00635 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.44■□□□□ 0.22
TRIM38O00635 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM38O00635 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.44■□□□□ 0.22
TRIM38O00635 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.44■□□□□ 0.22
TRIM38O00635 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM38O00635 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.44■□□□□ 0.22
TRIM38O00635 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.44■□□□□ 0.22
TRIM38O00635 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
TRIM38O00635 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM38O00635 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.44■□□□□ 0.22
TRIM38O00635 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.44■□□□□ 0.22
TRIM38O00635 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM38O00635 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM38O00635 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM38O00635 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.44■□□□□ 0.22
TRIM38O00635 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.44■□□□□ 0.22
TRIM38O00635 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM38O00635 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM38O00635 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.44■□□□□ 0.22
TRIM38O00635 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.44■□□□□ 0.22
TRIM38O00635 AC026150.2-201ENST00000564693 1156 ntBASIC16.44■□□□□ 0.22
TRIM38O00635 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.44■□□□□ 0.22
TRIM38O00635 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TRIM38O00635 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
TRIM38O00635 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM38O00635 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TRIM38O00635 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
TRIM38O00635 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
TRIM38O00635 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
TRIM38O00635 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TRIM38O00635 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM38O00635 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.44■□□□□ 0.22
TRIM38O00635 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TRIM38O00635 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM38O00635 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM38O00635 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TRIM38O00635 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM38O00635 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM38O00635 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM38O00635 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
TRIM38O00635 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.44■□□□□ 0.22
TRIM38O00635 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM38O00635 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM38O00635 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM38O00635 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TRIM38O00635 EGFEM1P-202ENST00000431685 1563 ntBASIC16.43■□□□□ 0.22
TRIM38O00635 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM38O00635 AC008677.1-201ENST00000519230 1561 ntBASIC16.43■□□□□ 0.22
TRIM38O00635 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM38O00635 AL353732.1-201ENST00000569618 1459 ntBASIC16.43■□□□□ 0.22
TRIM38O00635 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM38O00635 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TRIM38O00635 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.43■□□□□ 0.22
TRIM38O00635 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.43■□□□□ 0.22
TRIM38O00635 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TRIM38O00635 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM38O00635 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM38O00635 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.43■□□□□ 0.22
TRIM38O00635 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
TRIM38O00635 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM38O00635 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM38O00635 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
TRIM38O00635 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.43■□□□□ 0.22
TRIM38O00635 AC107890.1-201ENST00000422478 521 ntBASIC16.43■□□□□ 0.22
TRIM38O00635 BASP1P1-201ENST00000430708 665 ntBASIC16.43■□□□□ 0.22
TRIM38O00635 SPDYE14P-201ENST00000442619 822 ntBASIC16.43■□□□□ 0.22
TRIM38O00635 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.43■□□□□ 0.22
TRIM38O00635 AC109635.5-201ENST00000533593 962 ntBASIC16.43■□□□□ 0.22
TRIM38O00635 KRT8P23-201ENST00000560090 1207 ntBASIC16.43■□□□□ 0.22
TRIM38O00635 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.43■□□□□ 0.22
TRIM38O00635 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
TRIM38O00635 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TRIM38O00635 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM38O00635 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.43■□□□□ 0.22
TRIM38O00635 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM38O00635 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TRIM38O00635 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.43■□□□□ 0.22
TRIM38O00635 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM38O00635 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
TRIM38O00635 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM38O00635 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms