Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TLR4O00206 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
TLR4O00206 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.13■□□□□ 0.17
TLR4O00206 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TLR4O00206 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TLR4O00206 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TLR4O00206 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TLR4O00206 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.13■□□□□ 0.17
TLR4O00206 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
TLR4O00206 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TLR4O00206 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.13■□□□□ 0.17
TLR4O00206 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TLR4O00206 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.13■□□□□ 0.17
TLR4O00206 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.13■□□□□ 0.17
TLR4O00206 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.13■□□□□ 0.17
TLR4O00206 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.13■□□□□ 0.17
TLR4O00206 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.13■□□□□ 0.17
TLR4O00206 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.13■□□□□ 0.17
TLR4O00206 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.13■□□□□ 0.17
TLR4O00206 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.13■□□□□ 0.17
TLR4O00206 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TLR4O00206 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TLR4O00206 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.13■□□□□ 0.17
TLR4O00206 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
TLR4O00206 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.13■□□□□ 0.17
TLR4O00206 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.13■□□□□ 0.17
TLR4O00206 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.13■□□□□ 0.17
TLR4O00206 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.13■□□□□ 0.17
TLR4O00206 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TLR4O00206 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.13■□□□□ 0.17
TLR4O00206 AC007541.1-201ENST00000570282 1469 ntBASIC16.13■□□□□ 0.17
TLR4O00206 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.13■□□□□ 0.17
TLR4O00206 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TLR4O00206 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.13■□□□□ 0.17
TLR4O00206 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TLR4O00206 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
TLR4O00206 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TLR4O00206 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TLR4O00206 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TLR4O00206 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.13■□□□□ 0.17
TLR4O00206 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
TLR4O00206 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TLR4O00206 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
TLR4O00206 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TLR4O00206 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TLR4O00206 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
TLR4O00206 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TLR4O00206 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TLR4O00206 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TLR4O00206 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.12■□□□□ 0.17
TLR4O00206 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TLR4O00206 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TLR4O00206 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TLR4O00206 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TLR4O00206 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
TLR4O00206 AL645728.1-201ENST00000366221 2101 ntBASIC16.12■□□□□ 0.17
TLR4O00206 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TLR4O00206 BTBD7P1-201ENST00000447253 1453 ntBASIC16.12■□□□□ 0.17
TLR4O00206 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TLR4O00206 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TLR4O00206 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.12■□□□□ 0.17
TLR4O00206 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.12■□□□□ 0.17
TLR4O00206 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.12■□□□□ 0.17
TLR4O00206 AL353779.1-201ENST00000434793 351 ntBASIC16.12■□□□□ 0.17
TLR4O00206 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TLR4O00206 AC135586.1-201ENST00000539323 574 ntBASIC16.12■□□□□ 0.17
TLR4O00206 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.12■□□□□ 0.17
TLR4O00206 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.12■□□□□ 0.17
TLR4O00206 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.12■□□□□ 0.17
TLR4O00206 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.12■□□□□ 0.17
TLR4O00206 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.12■□□□□ 0.17
TLR4O00206 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.12■□□□□ 0.17
TLR4O00206 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.12■□□□□ 0.17
TLR4O00206 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.12■□□□□ 0.17
TLR4O00206 AC004840.1-201ENST00000636359 365 ntBASIC16.12■□□□□ 0.17
TLR4O00206 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TLR4O00206 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.12■□□□□ 0.17
TLR4O00206 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.12■□□□□ 0.17
TLR4O00206 AC105020.1-201ENST00000435356 2205 ntBASIC16.12■□□□□ 0.17
TLR4O00206 AL589702.1-201ENST00000641229 1509 ntBASIC16.12■□□□□ 0.17
TLR4O00206 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TLR4O00206 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.12■□□□□ 0.17
TLR4O00206 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.12■□□□□ 0.17
TLR4O00206 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TLR4O00206 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.12■□□□□ 0.17
TLR4O00206 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TLR4O00206 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TLR4O00206 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TLR4O00206 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TLR4O00206 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TLR4O00206 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TLR4O00206 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TLR4O00206 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TLR4O00206 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TLR4O00206 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TLR4O00206 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TLR4O00206 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.11■□□□□ 0.17
TLR4O00206 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TLR4O00206 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TLR4O00206 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms