Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.98■□□□□ 0.31
CCDC188H7C350 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC188H7C350 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CCDC188H7C350 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC188H7C350 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
CCDC188H7C350 AC021097.1-201ENST00000607902 574 ntBASIC16.98■□□□□ 0.31
CCDC188H7C350 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.98■□□□□ 0.31
CCDC188H7C350 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC188H7C350 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC188H7C350 AC087481.3-201ENST00000602886 1894 ntBASIC16.98■□□□□ 0.31
CCDC188H7C350 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC188H7C350 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CCDC188H7C350 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.98■□□□□ 0.31
CCDC188H7C350 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC188H7C350 AC011477.6-201ENST00000604980 1927 ntBASIC16.98■□□□□ 0.31
CCDC188H7C350 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC188H7C350 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
CCDC188H7C350 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC188H7C350 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC188H7C350 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CCDC188H7C350 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC188H7C350 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC188H7C350 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC188H7C350 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC188H7C350 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC188H7C350 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC188H7C350 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CCDC188H7C350 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC188H7C350 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
CCDC188H7C350 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
CCDC188H7C350 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC188H7C350 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC188H7C350 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC188H7C350 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC188H7C350 SCARNA2-201ENST00000458748 420 ntBASIC16.97■□□□□ 0.31
CCDC188H7C350 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC188H7C350 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC188H7C350 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC188H7C350 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC188H7C350 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC188H7C350 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC188H7C350 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC188H7C350 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC188H7C350 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC188H7C350 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC188H7C350 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC188H7C350 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC188H7C350 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC188H7C350 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC188H7C350 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC188H7C350 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC188H7C350 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC188H7C350 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC188H7C350 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC188H7C350 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC188H7C350 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC188H7C350 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC188H7C350 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC188H7C350 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC188H7C350 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CCDC188H7C350 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC188H7C350 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC188H7C350 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC188H7C350 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CCDC188H7C350 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC188H7C350 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.96■□□□□ 0.31
CCDC188H7C350 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC188H7C350 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC188H7C350 AC245100.5-201ENST00000452108 331 ntBASIC16.96■□□□□ 0.31
CCDC188H7C350 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.96■□□□□ 0.31
CCDC188H7C350 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC188H7C350 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.96■□□□□ 0.31
CCDC188H7C350 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CCDC188H7C350 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.96■□□□□ 0.31
CCDC188H7C350 AC087388.1-201ENST00000571370 1112 ntBASIC16.96■□□□□ 0.31
CCDC188H7C350 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
CCDC188H7C350 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC188H7C350 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
CCDC188H7C350 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC188H7C350 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.96■□□□□ 0.31
CCDC188H7C350 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC188H7C350 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC188H7C350 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC188H7C350 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
CCDC188H7C350 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CCDC188H7C350 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC188H7C350 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC188H7C350 AP003680.1-201ENST00000598970 3660 ntBASIC16.96■□□□□ 0.31
CCDC188H7C350 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC188H7C350 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC188H7C350 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
CCDC188H7C350 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CCDC188H7C350 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CCDC188H7C350 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
CCDC188H7C350 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC188H7C350 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC188H7C350 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC188H7C350 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC188H7C350 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC188H7C350 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms