Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.27□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.27□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.26□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC14.26□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 LINC00167-201ENST00000530583 1419 ntBASIC14.26□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.26□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.26□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.26□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 AC239809.2-201ENST00000415381 517 ntBASIC14.26□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC14.26□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC14.26□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 Six3os1_6.1-201ENST00000620790 196 ntBASIC14.26□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 TBCB-214ENST00000629269 413 ntTSL 5 BASIC14.26□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.26□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.26□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.26□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.26□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.26□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 BX276092.7-203ENST00000637198 1536 ntBASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 KRT8P7-201ENST00000533003 1432 ntBASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 ESRRAP1-201ENST00000400596 1257 ntBASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 MTDHP1-201ENST00000605323 784 ntBASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 STK40-201ENST00000359297 4837 ntTSL 2 BASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC14.24□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
BOLA2-SMG1P6H3BVE0 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms