Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.03■□□□□ 0.16
VGLL3A8MV65 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.03■□□□□ 0.16
VGLL3A8MV65 UBE2SP1-201ENST00000450587 669 ntBASIC16.03■□□□□ 0.16
VGLL3A8MV65 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.03■□□□□ 0.16
VGLL3A8MV65 C1QBPP2-201ENST00000528754 825 ntBASIC16.03■□□□□ 0.16
VGLL3A8MV65 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.03■□□□□ 0.16
VGLL3A8MV65 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.03■□□□□ 0.16
VGLL3A8MV65 AL121906.2-201ENST00000621597 723 ntBASIC16.03■□□□□ 0.16
VGLL3A8MV65 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.03■□□□□ 0.16
VGLL3A8MV65 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.03■□□□□ 0.16
VGLL3A8MV65 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
VGLL3A8MV65 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
VGLL3A8MV65 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC16.03■□□□□ 0.16
VGLL3A8MV65 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
VGLL3A8MV65 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC16.03■□□□□ 0.16
VGLL3A8MV65 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
VGLL3A8MV65 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
VGLL3A8MV65 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VGLL3A8MV65 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VGLL3A8MV65 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
VGLL3A8MV65 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
VGLL3A8MV65 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VGLL3A8MV65 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
VGLL3A8MV65 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
VGLL3A8MV65 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
VGLL3A8MV65 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.02■□□□□ 0.16
VGLL3A8MV65 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VGLL3A8MV65 AC093525.9-201ENST00000624961 1746 ntBASIC16.02■□□□□ 0.16
VGLL3A8MV65 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.02■□□□□ 0.16
VGLL3A8MV65 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
VGLL3A8MV65 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VGLL3A8MV65 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.02■□□□□ 0.16
VGLL3A8MV65 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
VGLL3A8MV65 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.16
VGLL3A8MV65 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC16.02■□□□□ 0.16
VGLL3A8MV65 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VGLL3A8MV65 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC16.02■□□□□ 0.16
VGLL3A8MV65 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
VGLL3A8MV65 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.02■□□□□ 0.16
VGLL3A8MV65 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
VGLL3A8MV65 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
VGLL3A8MV65 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VGLL3A8MV65 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VGLL3A8MV65 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
VGLL3A8MV65 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VGLL3A8MV65 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
VGLL3A8MV65 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VGLL3A8MV65 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
VGLL3A8MV65 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
VGLL3A8MV65 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
VGLL3A8MV65 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.02■□□□□ 0.16
VGLL3A8MV65 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
VGLL3A8MV65 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.02■□□□□ 0.16
VGLL3A8MV65 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
VGLL3A8MV65 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
VGLL3A8MV65 AL158047.1-201ENST00000445918 881 ntBASIC16.02■□□□□ 0.16
VGLL3A8MV65 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.02■□□□□ 0.16
VGLL3A8MV65 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.02■□□□□ 0.16
VGLL3A8MV65 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
VGLL3A8MV65 PRKY-204ENST00000533551 1019 ntBASIC16.02■□□□□ 0.16
VGLL3A8MV65 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
VGLL3A8MV65 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.02■□□□□ 0.16
VGLL3A8MV65 AC066615.1-201ENST00000640911 628 ntBASIC16.02■□□□□ 0.16
VGLL3A8MV65 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
VGLL3A8MV65 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
VGLL3A8MV65 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
VGLL3A8MV65 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
VGLL3A8MV65 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
VGLL3A8MV65 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
VGLL3A8MV65 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.02■□□□□ 0.15
VGLL3A8MV65 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC16.02■□□□□ 0.15
VGLL3A8MV65 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
VGLL3A8MV65 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.02■□□□□ 0.15
VGLL3A8MV65 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
VGLL3A8MV65 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
VGLL3A8MV65 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
VGLL3A8MV65 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
VGLL3A8MV65 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
VGLL3A8MV65 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
VGLL3A8MV65 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
VGLL3A8MV65 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
VGLL3A8MV65 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VGLL3A8MV65 DHX58-201ENST00000251642 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VGLL3A8MV65 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
VGLL3A8MV65 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.01■□□□□ 0.15
VGLL3A8MV65 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
VGLL3A8MV65 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC16.01■□□□□ 0.15
VGLL3A8MV65 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VGLL3A8MV65 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC16.01■□□□□ 0.15
VGLL3A8MV65 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
VGLL3A8MV65 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.01■□□□□ 0.15
VGLL3A8MV65 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
VGLL3A8MV65 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC16.01■□□□□ 0.15
VGLL3A8MV65 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
VGLL3A8MV65 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
VGLL3A8MV65 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC16.01■□□□□ 0.15
VGLL3A8MV65 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
VGLL3A8MV65 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
VGLL3A8MV65 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
VGLL3A8MV65 VENTXP1-201ENST00000569334 2716 ntBASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms