Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
CCDC162PA2VCL2 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC162PA2VCL2 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.34■□□□□ 0.21
CCDC162PA2VCL2 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.34■□□□□ 0.21
CCDC162PA2VCL2 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CCDC162PA2VCL2 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC162PA2VCL2 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC162PA2VCL2 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC162PA2VCL2 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC162PA2VCL2 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.34■□□□□ 0.21
CCDC162PA2VCL2 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC162PA2VCL2 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC162PA2VCL2 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC162PA2VCL2 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.34■□□□□ 0.21
CCDC162PA2VCL2 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC162PA2VCL2 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CCDC162PA2VCL2 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCDC162PA2VCL2 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCDC162PA2VCL2 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCDC162PA2VCL2 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.33■□□□□ 0.21
CCDC162PA2VCL2 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
CCDC162PA2VCL2 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CCDC162PA2VCL2 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
CCDC162PA2VCL2 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CCDC162PA2VCL2 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
CCDC162PA2VCL2 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.21
CCDC162PA2VCL2 AL603832.2-201ENST00000566195 2125 ntBASIC16.33■□□□□ 0.21
CCDC162PA2VCL2 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC162PA2VCL2 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC162PA2VCL2 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.33■□□□□ 0.2
CCDC162PA2VCL2 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.33■□□□□ 0.2
CCDC162PA2VCL2 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.33■□□□□ 0.2
CCDC162PA2VCL2 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC162PA2VCL2 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.33■□□□□ 0.2
CCDC162PA2VCL2 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.33■□□□□ 0.2
CCDC162PA2VCL2 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.33■□□□□ 0.2
CCDC162PA2VCL2 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.33■□□□□ 0.2
CCDC162PA2VCL2 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.33■□□□□ 0.2
CCDC162PA2VCL2 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.33■□□□□ 0.2
CCDC162PA2VCL2 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.33■□□□□ 0.2
CCDC162PA2VCL2 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.33■□□□□ 0.2
CCDC162PA2VCL2 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CCDC162PA2VCL2 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
CCDC162PA2VCL2 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC162PA2VCL2 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC162PA2VCL2 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.33■□□□□ 0.2
CCDC162PA2VCL2 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC162PA2VCL2 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CCDC162PA2VCL2 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.33■□□□□ 0.2
CCDC162PA2VCL2 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
CCDC162PA2VCL2 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC162PA2VCL2 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC162PA2VCL2 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC162PA2VCL2 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.33■□□□□ 0.2
CCDC162PA2VCL2 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.33■□□□□ 0.2
CCDC162PA2VCL2 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC162PA2VCL2 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CCDC162PA2VCL2 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC162PA2VCL2 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC162PA2VCL2 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.32■□□□□ 0.2
CCDC162PA2VCL2 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CCDC162PA2VCL2 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CCDC162PA2VCL2 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC162PA2VCL2 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC162PA2VCL2 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC162PA2VCL2 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC162PA2VCL2 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC162PA2VCL2 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC162PA2VCL2 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC162PA2VCL2 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC162PA2VCL2 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC162PA2VCL2 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC162PA2VCL2 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC162PA2VCL2 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC162PA2VCL2 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC162PA2VCL2 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC162PA2VCL2 TFAMP1-201ENST00000412727 736 ntBASIC16.32■□□□□ 0.2
CCDC162PA2VCL2 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC162PA2VCL2 ADH5P3-201ENST00000433842 1137 ntBASIC16.32■□□□□ 0.2
CCDC162PA2VCL2 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC162PA2VCL2 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC162PA2VCL2 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
CCDC162PA2VCL2 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC162PA2VCL2 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC162PA2VCL2 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC162PA2VCL2 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC162PA2VCL2 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.32■□□□□ 0.2
CCDC162PA2VCL2 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
CCDC162PA2VCL2 AL135744.1-201ENST00000565098 629 ntBASIC16.32■□□□□ 0.2
CCDC162PA2VCL2 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.32■□□□□ 0.2
CCDC162PA2VCL2 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CCDC162PA2VCL2 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC162PA2VCL2 C20orf181-201ENST00000623918 480 ntBASIC16.32■□□□□ 0.2
CCDC162PA2VCL2 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.32■□□□□ 0.2
CCDC162PA2VCL2 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.32■□□□□ 0.2
CCDC162PA2VCL2 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC162PA2VCL2 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC162PA2VCL2 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC162PA2VCL2 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC162PA2VCL2 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms