Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC187A0A096LP49 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CCDC187A0A096LP49 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC187A0A096LP49 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC187A0A096LP49 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC187A0A096LP49 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
CCDC187A0A096LP49 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC187A0A096LP49 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CCDC187A0A096LP49 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC187A0A096LP49 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC187A0A096LP49 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.37■□□□□ 0.05
CCDC187A0A096LP49 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.37■□□□□ 0.05
CCDC187A0A096LP49 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.37■□□□□ 0.05
CCDC187A0A096LP49 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
CCDC187A0A096LP49 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC187A0A096LP49 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.37■□□□□ 0.05
CCDC187A0A096LP49 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.37■□□□□ 0.05
CCDC187A0A096LP49 TMEM14DP-201ENST00000422205 345 ntBASIC15.37■□□□□ 0.05
CCDC187A0A096LP49 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.37■□□□□ 0.05
CCDC187A0A096LP49 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC187A0A096LP49 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.37■□□□□ 0.05
CCDC187A0A096LP49 RARRES2P5-201ENST00000564013 466 ntBASIC15.37■□□□□ 0.05
CCDC187A0A096LP49 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.37■□□□□ 0.05
CCDC187A0A096LP49 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CCDC187A0A096LP49 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC15.37■□□□□ 0.05
CCDC187A0A096LP49 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC187A0A096LP49 AC133552.6-201ENST00000613406 534 ntBASIC15.37■□□□□ 0.05
CCDC187A0A096LP49 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC187A0A096LP49 AL033527.5-201ENST00000641382 801 ntBASIC15.37■□□□□ 0.05
CCDC187A0A096LP49 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC187A0A096LP49 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.37■□□□□ 0.05
CCDC187A0A096LP49 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC187A0A096LP49 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC187A0A096LP49 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
CCDC187A0A096LP49 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC187A0A096LP49 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.37■□□□□ 0.05
CCDC187A0A096LP49 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
CCDC187A0A096LP49 GGT4P-201ENST00000623672 1708 ntBASIC15.37■□□□□ 0.05
CCDC187A0A096LP49 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC187A0A096LP49 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC187A0A096LP49 AL645728.1-201ENST00000366221 2101 ntBASIC15.37■□□□□ 0.05
CCDC187A0A096LP49 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC187A0A096LP49 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CCDC187A0A096LP49 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.36■□□□□ 0.05
CCDC187A0A096LP49 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC187A0A096LP49 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC187A0A096LP49 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC187A0A096LP49 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.36■□□□□ 0.05
CCDC187A0A096LP49 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC187A0A096LP49 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC187A0A096LP49 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC187A0A096LP49 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC187A0A096LP49 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC187A0A096LP49 CLK3P2-201ENST00000427566 1453 ntBASIC15.36■□□□□ 0.05
CCDC187A0A096LP49 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.36■□□□□ 0.05
CCDC187A0A096LP49 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
CCDC187A0A096LP49 OR6D1P-203ENST00000641209 4860 ntBASIC15.36■□□□□ 0.05
CCDC187A0A096LP49 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC187A0A096LP49 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.36■□□□□ 0.05
CCDC187A0A096LP49 BOLA2P3-201ENST00000404566 256 ntBASIC15.36■□□□□ 0.05
CCDC187A0A096LP49 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.36■□□□□ 0.05
CCDC187A0A096LP49 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.36■□□□□ 0.05
CCDC187A0A096LP49 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CCDC187A0A096LP49 KRT223P-202ENST00000449164 1292 ntBASIC15.36■□□□□ 0.05
CCDC187A0A096LP49 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.36■□□□□ 0.05
CCDC187A0A096LP49 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.36■□□□□ 0.05
CCDC187A0A096LP49 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.36■□□□□ 0.05
CCDC187A0A096LP49 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC187A0A096LP49 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.36■□□□□ 0.05
CCDC187A0A096LP49 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.36■□□□□ 0.05
CCDC187A0A096LP49 MIR8072-201ENST00000614241 80 ntBASIC15.36■□□□□ 0.05
CCDC187A0A096LP49 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.36■□□□□ 0.05
CCDC187A0A096LP49 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.36■□□□□ 0.05
CCDC187A0A096LP49 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC187A0A096LP49 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC187A0A096LP49 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC187A0A096LP49 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC187A0A096LP49 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC187A0A096LP49 PRORSD1P-202ENST00000563365 2154 ntBASIC15.36■□□□□ 0.05
CCDC187A0A096LP49 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC187A0A096LP49 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.36■□□□□ 0.05
CCDC187A0A096LP49 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC187A0A096LP49 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CCDC187A0A096LP49 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC187A0A096LP49 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC187A0A096LP49 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.35■□□□□ 0.05
CCDC187A0A096LP49 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CCDC187A0A096LP49 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC187A0A096LP49 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.35■□□□□ 0.05
CCDC187A0A096LP49 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CCDC187A0A096LP49 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CCDC187A0A096LP49 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms