Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.8■□□□□ 0.6
R3HCC1Q9Y3T6 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.8■□□□□ 0.6
R3HCC1Q9Y3T6 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.8■□□□□ 0.6
R3HCC1Q9Y3T6 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
R3HCC1Q9Y3T6 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
R3HCC1Q9Y3T6 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
R3HCC1Q9Y3T6 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
R3HCC1Q9Y3T6 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
R3HCC1Q9Y3T6 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
R3HCC1Q9Y3T6 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
R3HCC1Q9Y3T6 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
R3HCC1Q9Y3T6 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
R3HCC1Q9Y3T6 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
R3HCC1Q9Y3T6 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.79■□□□□ 0.6
R3HCC1Q9Y3T6 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
R3HCC1Q9Y3T6 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
R3HCC1Q9Y3T6 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
R3HCC1Q9Y3T6 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
R3HCC1Q9Y3T6 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
R3HCC1Q9Y3T6 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
R3HCC1Q9Y3T6 TPO-203ENST00000346956 2923 ntTSL 5 BASIC18.79■□□□□ 0.6
R3HCC1Q9Y3T6 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
R3HCC1Q9Y3T6 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
R3HCC1Q9Y3T6 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.79■□□□□ 0.6
R3HCC1Q9Y3T6 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
R3HCC1Q9Y3T6 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.79■□□□□ 0.6
R3HCC1Q9Y3T6 PRYP5-201ENST00000451909 266 ntBASIC18.79■□□□□ 0.6
R3HCC1Q9Y3T6 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
R3HCC1Q9Y3T6 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
R3HCC1Q9Y3T6 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.79■□□□□ 0.6
R3HCC1Q9Y3T6 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.79■□□□□ 0.6
R3HCC1Q9Y3T6 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.79■□□□□ 0.6
R3HCC1Q9Y3T6 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC18.79■□□□□ 0.6
R3HCC1Q9Y3T6 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
R3HCC1Q9Y3T6 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
R3HCC1Q9Y3T6 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.79■□□□□ 0.6
R3HCC1Q9Y3T6 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
R3HCC1Q9Y3T6 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
R3HCC1Q9Y3T6 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.79■□□□□ 0.6
R3HCC1Q9Y3T6 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
R3HCC1Q9Y3T6 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC18.79■□□□□ 0.6
R3HCC1Q9Y3T6 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
R3HCC1Q9Y3T6 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.79■□□□□ 0.6
R3HCC1Q9Y3T6 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
R3HCC1Q9Y3T6 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
R3HCC1Q9Y3T6 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC18.79■□□□□ 0.6
R3HCC1Q9Y3T6 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
R3HCC1Q9Y3T6 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
R3HCC1Q9Y3T6 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
R3HCC1Q9Y3T6 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
R3HCC1Q9Y3T6 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC18.78■□□□□ 0.6
R3HCC1Q9Y3T6 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
R3HCC1Q9Y3T6 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
R3HCC1Q9Y3T6 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
R3HCC1Q9Y3T6 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
R3HCC1Q9Y3T6 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.78■□□□□ 0.6
R3HCC1Q9Y3T6 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
R3HCC1Q9Y3T6 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
R3HCC1Q9Y3T6 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.78■□□□□ 0.6
R3HCC1Q9Y3T6 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
R3HCC1Q9Y3T6 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
R3HCC1Q9Y3T6 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
R3HCC1Q9Y3T6 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
R3HCC1Q9Y3T6 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.78■□□□□ 0.6
R3HCC1Q9Y3T6 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
R3HCC1Q9Y3T6 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
R3HCC1Q9Y3T6 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
R3HCC1Q9Y3T6 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.78■□□□□ 0.6
R3HCC1Q9Y3T6 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
R3HCC1Q9Y3T6 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
R3HCC1Q9Y3T6 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
R3HCC1Q9Y3T6 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
R3HCC1Q9Y3T6 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.78■□□□□ 0.6
R3HCC1Q9Y3T6 AL773604.1-201ENST00000617417 272 ntBASIC18.78■□□□□ 0.6
R3HCC1Q9Y3T6 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.78■□□□□ 0.6
R3HCC1Q9Y3T6 AC073592.4-201ENST00000623827 446 ntBASIC18.78■□□□□ 0.6
R3HCC1Q9Y3T6 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC18.78■□□□□ 0.6
R3HCC1Q9Y3T6 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
R3HCC1Q9Y3T6 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
R3HCC1Q9Y3T6 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
R3HCC1Q9Y3T6 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.78■□□□□ 0.6
R3HCC1Q9Y3T6 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
R3HCC1Q9Y3T6 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
R3HCC1Q9Y3T6 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
R3HCC1Q9Y3T6 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.77■□□□□ 0.6
R3HCC1Q9Y3T6 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
R3HCC1Q9Y3T6 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
R3HCC1Q9Y3T6 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
R3HCC1Q9Y3T6 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
R3HCC1Q9Y3T6 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC18.77■□□□□ 0.6
R3HCC1Q9Y3T6 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
R3HCC1Q9Y3T6 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
R3HCC1Q9Y3T6 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
R3HCC1Q9Y3T6 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
R3HCC1Q9Y3T6 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
R3HCC1Q9Y3T6 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
R3HCC1Q9Y3T6 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
R3HCC1Q9Y3T6 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.77■□□□□ 0.6
R3HCC1Q9Y3T6 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
R3HCC1Q9Y3T6 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms