Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 HAUS4P1-201ENST00000406739 1145 ntBASIC18.59■□□□□ 0.57
PCDHA4Q9UN74 TSEN15P1-201ENST00000423257 515 ntBASIC18.59■□□□□ 0.57
PCDHA4Q9UN74 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.59■□□□□ 0.57
PCDHA4Q9UN74 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.59■□□□□ 0.57
PCDHA4Q9UN74 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHA4Q9UN74 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.59■□□□□ 0.57
PCDHA4Q9UN74 AC109322.1-201ENST00000524499 1264 ntBASIC18.59■□□□□ 0.57
PCDHA4Q9UN74 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHA4Q9UN74 AL512356.2-201ENST00000546955 174 ntBASIC18.59■□□□□ 0.57
PCDHA4Q9UN74 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
PCDHA4Q9UN74 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.59■□□□□ 0.57
PCDHA4Q9UN74 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHA4Q9UN74 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHA4Q9UN74 AC018529.1-201ENST00000613063 361 ntBASIC18.59■□□□□ 0.57
PCDHA4Q9UN74 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHA4Q9UN74 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PCDHA4Q9UN74 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PCDHA4Q9UN74 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHA4Q9UN74 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHA4Q9UN74 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PCDHA4Q9UN74 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHA4Q9UN74 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHA4Q9UN74 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PCDHA4Q9UN74 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PCDHA4Q9UN74 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PCDHA4Q9UN74 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHA4Q9UN74 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHA4Q9UN74 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.57
PCDHA4Q9UN74 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHA4Q9UN74 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHA4Q9UN74 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHA4Q9UN74 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHA4Q9UN74 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC18.58■□□□□ 0.57
PCDHA4Q9UN74 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
PCDHA4Q9UN74 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHA4Q9UN74 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHA4Q9UN74 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHA4Q9UN74 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC18.58■□□□□ 0.56
PCDHA4Q9UN74 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHA4Q9UN74 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDHA4Q9UN74 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.58■□□□□ 0.56
PCDHA4Q9UN74 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.58■□□□□ 0.56
PCDHA4Q9UN74 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.58■□□□□ 0.56
PCDHA4Q9UN74 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.58■□□□□ 0.56
PCDHA4Q9UN74 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.58■□□□□ 0.56
PCDHA4Q9UN74 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDHA4Q9UN74 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHA4Q9UN74 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHA4Q9UN74 AC008677.1-201ENST00000519230 1561 ntBASIC18.58■□□□□ 0.56
PCDHA4Q9UN74 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
PCDHA4Q9UN74 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHA4Q9UN74 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHA4Q9UN74 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHA4Q9UN74 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.58■□□□□ 0.56
PCDHA4Q9UN74 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDHA4Q9UN74 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
PCDHA4Q9UN74 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
PCDHA4Q9UN74 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHA4Q9UN74 AL603832.2-201ENST00000566195 2125 ntBASIC18.58■□□□□ 0.56
PCDHA4Q9UN74 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDHA4Q9UN74 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHA4Q9UN74 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHA4Q9UN74 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHA4Q9UN74 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDHA4Q9UN74 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHA4Q9UN74 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHA4Q9UN74 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PCDHA4Q9UN74 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
PCDHA4Q9UN74 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PCDHA4Q9UN74 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDHA4Q9UN74 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHA4Q9UN74 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDHA4Q9UN74 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHA4Q9UN74 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHA4Q9UN74 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHA4Q9UN74 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHA4Q9UN74 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHA4Q9UN74 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PCDHA4Q9UN74 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PCDHA4Q9UN74 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHA4Q9UN74 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHA4Q9UN74 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PCDHA4Q9UN74 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHA4Q9UN74 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.57■□□□□ 0.56
PCDHA4Q9UN74 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.57■□□□□ 0.56
PCDHA4Q9UN74 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PCDHA4Q9UN74 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHA4Q9UN74 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHA4Q9UN74 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHA4Q9UN74 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDHA4Q9UN74 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHA4Q9UN74 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC18.57■□□□□ 0.56
PCDHA4Q9UN74 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDHA4Q9UN74 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHA4Q9UN74 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHA4Q9UN74 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHA4Q9UN74 AC024909.3-201ENST00000611513 2257 ntBASIC18.57■□□□□ 0.56
PCDHA4Q9UN74 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHA4Q9UN74 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHA4Q9UN74 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms