Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NPC1L1Q9UHC9 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
NPC1L1Q9UHC9 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.07
NPC1L1Q9UHC9 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC21.7■■□□□ 1.06
NPC1L1Q9UHC9 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NPC1L1Q9UHC9 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC21.7■■□□□ 1.06
NPC1L1Q9UHC9 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
NPC1L1Q9UHC9 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC21.7■■□□□ 1.06
NPC1L1Q9UHC9 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NPC1L1Q9UHC9 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NPC1L1Q9UHC9 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NPC1L1Q9UHC9 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NPC1L1Q9UHC9 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NPC1L1Q9UHC9 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NPC1L1Q9UHC9 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NPC1L1Q9UHC9 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NPC1L1Q9UHC9 ELP6-209ENST00000446787 894 ntTSL 3 BASIC21.7■■□□□ 1.06
NPC1L1Q9UHC9 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC21.7■■□□□ 1.06
NPC1L1Q9UHC9 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NPC1L1Q9UHC9 IGHV3-42-201ENST00000520410 361 ntBASIC21.7■■□□□ 1.06
NPC1L1Q9UHC9 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC21.7■■□□□ 1.06
NPC1L1Q9UHC9 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC21.7■■□□□ 1.06
NPC1L1Q9UHC9 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
NPC1L1Q9UHC9 AC008738.7-201ENST00000609744 511 ntBASIC21.7■■□□□ 1.06
NPC1L1Q9UHC9 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC21.7■■□□□ 1.06
NPC1L1Q9UHC9 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NPC1L1Q9UHC9 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
NPC1L1Q9UHC9 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
NPC1L1Q9UHC9 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC21.69■■□□□ 1.06
NPC1L1Q9UHC9 FLII-221ENST00000578558 2377 ntTSL 5 BASIC21.69■■□□□ 1.06
NPC1L1Q9UHC9 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC21.69■■□□□ 1.06
NPC1L1Q9UHC9 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
NPC1L1Q9UHC9 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC21.69■■□□□ 1.06
NPC1L1Q9UHC9 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NPC1L1Q9UHC9 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NPC1L1Q9UHC9 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
NPC1L1Q9UHC9 AC022188.1-201ENST00000620960 1664 ntBASIC21.69■■□□□ 1.06
NPC1L1Q9UHC9 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
NPC1L1Q9UHC9 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NPC1L1Q9UHC9 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NPC1L1Q9UHC9 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC21.69■■□□□ 1.06
NPC1L1Q9UHC9 RPL13P2-201ENST00000440687 659 ntBASIC21.69■■□□□ 1.06
NPC1L1Q9UHC9 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC21.69■■□□□ 1.06
NPC1L1Q9UHC9 RNA5SP421-201ENST00000516864 134 ntBASIC21.69■■□□□ 1.06
NPC1L1Q9UHC9 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC21.69■■□□□ 1.06
NPC1L1Q9UHC9 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC21.69■■□□□ 1.06
NPC1L1Q9UHC9 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
NPC1L1Q9UHC9 AC092337.1-201ENST00000568699 1129 ntBASIC21.69■■□□□ 1.06
NPC1L1Q9UHC9 PRR29-204ENST00000577953 565 ntTSL 4 BASIC21.69■■□□□ 1.06
NPC1L1Q9UHC9 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NPC1L1Q9UHC9 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NPC1L1Q9UHC9 AC074044.1-201ENST00000609673 707 ntBASIC21.69■■□□□ 1.06
NPC1L1Q9UHC9 HFE2-206ENST00000634927 506 ntTSL 4 BASIC21.69■■□□□ 1.06
NPC1L1Q9UHC9 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
NPC1L1Q9UHC9 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC21.69■■□□□ 1.06
NPC1L1Q9UHC9 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC21.69■■□□□ 1.06
NPC1L1Q9UHC9 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC21.69■■□□□ 1.06
NPC1L1Q9UHC9 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NPC1L1Q9UHC9 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC21.69■■□□□ 1.06
NPC1L1Q9UHC9 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NPC1L1Q9UHC9 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC21.68■■□□□ 1.06
NPC1L1Q9UHC9 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
NPC1L1Q9UHC9 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NPC1L1Q9UHC9 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC21.68■■□□□ 1.06
NPC1L1Q9UHC9 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
NPC1L1Q9UHC9 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
NPC1L1Q9UHC9 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
NPC1L1Q9UHC9 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
NPC1L1Q9UHC9 SUPT20HL2-201ENST00000486479 2409 ntBASIC21.68■■□□□ 1.06
NPC1L1Q9UHC9 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
NPC1L1Q9UHC9 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC21.68■■□□□ 1.06
NPC1L1Q9UHC9 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC21.68■■□□□ 1.06
NPC1L1Q9UHC9 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC21.68■■□□□ 1.06
NPC1L1Q9UHC9 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC21.68■■□□□ 1.06
NPC1L1Q9UHC9 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC21.68■■□□□ 1.06
NPC1L1Q9UHC9 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC21.68■■□□□ 1.06
NPC1L1Q9UHC9 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC21.68■■□□□ 1.06
NPC1L1Q9UHC9 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC21.68■■□□□ 1.06
NPC1L1Q9UHC9 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC21.68■■□□□ 1.06
NPC1L1Q9UHC9 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC21.68■■□□□ 1.06
NPC1L1Q9UHC9 AC004840.1-201ENST00000636359 365 ntBASIC21.68■■□□□ 1.06
NPC1L1Q9UHC9 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NPC1L1Q9UHC9 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
NPC1L1Q9UHC9 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
NPC1L1Q9UHC9 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC21.67■■□□□ 1.06
NPC1L1Q9UHC9 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NPC1L1Q9UHC9 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
NPC1L1Q9UHC9 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NPC1L1Q9UHC9 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NPC1L1Q9UHC9 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC21.67■■□□□ 1.06
NPC1L1Q9UHC9 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NPC1L1Q9UHC9 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NPC1L1Q9UHC9 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
NPC1L1Q9UHC9 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NPC1L1Q9UHC9 SYS1-203ENST00000414310 795 ntTSL 3 BASIC21.67■■□□□ 1.06
NPC1L1Q9UHC9 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NPC1L1Q9UHC9 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC21.67■■□□□ 1.06
NPC1L1Q9UHC9 TARDBPP1-201ENST00000442013 1203 ntBASIC21.67■■□□□ 1.06
NPC1L1Q9UHC9 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NPC1L1Q9UHC9 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms