Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HDAC6Q9UBN7 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
HDAC6Q9UBN7 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HDAC6Q9UBN7 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
HDAC6Q9UBN7 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.46■□□□□ 0.55
HDAC6Q9UBN7 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.46■□□□□ 0.55
HDAC6Q9UBN7 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
HDAC6Q9UBN7 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.54
HDAC6Q9UBN7 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
HDAC6Q9UBN7 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
HDAC6Q9UBN7 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HDAC6Q9UBN7 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HDAC6Q9UBN7 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.45■□□□□ 0.54
HDAC6Q9UBN7 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HDAC6Q9UBN7 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.45■□□□□ 0.54
HDAC6Q9UBN7 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HDAC6Q9UBN7 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HDAC6Q9UBN7 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
HDAC6Q9UBN7 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HDAC6Q9UBN7 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HDAC6Q9UBN7 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.45■□□□□ 0.54
HDAC6Q9UBN7 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.45■□□□□ 0.54
HDAC6Q9UBN7 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
HDAC6Q9UBN7 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HDAC6Q9UBN7 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.45■□□□□ 0.54
HDAC6Q9UBN7 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HDAC6Q9UBN7 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HDAC6Q9UBN7 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.45■□□□□ 0.54
HDAC6Q9UBN7 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.45■□□□□ 0.54
HDAC6Q9UBN7 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
HDAC6Q9UBN7 AC100757.3-201ENST00000622361 1406 ntBASIC18.45■□□□□ 0.54
HDAC6Q9UBN7 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HDAC6Q9UBN7 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC18.45■□□□□ 0.54
HDAC6Q9UBN7 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HDAC6Q9UBN7 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HDAC6Q9UBN7 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HDAC6Q9UBN7 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.45■□□□□ 0.54
HDAC6Q9UBN7 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.45■□□□□ 0.54
HDAC6Q9UBN7 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
HDAC6Q9UBN7 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.45■□□□□ 0.54
HDAC6Q9UBN7 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
HDAC6Q9UBN7 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HDAC6Q9UBN7 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HDAC6Q9UBN7 AC092364.2-201ENST00000596710 2692 ntBASIC18.45■□□□□ 0.54
HDAC6Q9UBN7 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HDAC6Q9UBN7 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HDAC6Q9UBN7 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HDAC6Q9UBN7 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HDAC6Q9UBN7 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
HDAC6Q9UBN7 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.44■□□□□ 0.54
HDAC6Q9UBN7 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
HDAC6Q9UBN7 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HDAC6Q9UBN7 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HDAC6Q9UBN7 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
HDAC6Q9UBN7 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
HDAC6Q9UBN7 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HDAC6Q9UBN7 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HDAC6Q9UBN7 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HDAC6Q9UBN7 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.44■□□□□ 0.54
HDAC6Q9UBN7 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.44■□□□□ 0.54
HDAC6Q9UBN7 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.44■□□□□ 0.54
HDAC6Q9UBN7 TSSK5P-201ENST00000423978 907 ntBASIC18.44■□□□□ 0.54
HDAC6Q9UBN7 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.44■□□□□ 0.54
HDAC6Q9UBN7 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.44■□□□□ 0.54
HDAC6Q9UBN7 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.44■□□□□ 0.54
HDAC6Q9UBN7 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
HDAC6Q9UBN7 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.44■□□□□ 0.54
HDAC6Q9UBN7 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HDAC6Q9UBN7 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
HDAC6Q9UBN7 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
HDAC6Q9UBN7 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
HDAC6Q9UBN7 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HDAC6Q9UBN7 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
HDAC6Q9UBN7 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HDAC6Q9UBN7 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.44■□□□□ 0.54
HDAC6Q9UBN7 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
HDAC6Q9UBN7 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.44■□□□□ 0.54
HDAC6Q9UBN7 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HDAC6Q9UBN7 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HDAC6Q9UBN7 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
HDAC6Q9UBN7 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
HDAC6Q9UBN7 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
HDAC6Q9UBN7 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.43■□□□□ 0.54
HDAC6Q9UBN7 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
HDAC6Q9UBN7 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HDAC6Q9UBN7 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HDAC6Q9UBN7 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
HDAC6Q9UBN7 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC18.43■□□□□ 0.54
HDAC6Q9UBN7 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.43■□□□□ 0.54
HDAC6Q9UBN7 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.43■□□□□ 0.54
HDAC6Q9UBN7 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HDAC6Q9UBN7 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HDAC6Q9UBN7 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HDAC6Q9UBN7 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.43■□□□□ 0.54
HDAC6Q9UBN7 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.43■□□□□ 0.54
HDAC6Q9UBN7 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HDAC6Q9UBN7 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.43■□□□□ 0.54
HDAC6Q9UBN7 AC244107.1-201ENST00000442033 332 ntBASIC18.43■□□□□ 0.54
HDAC6Q9UBN7 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.43■□□□□ 0.54
HDAC6Q9UBN7 SERBP1P5-201ENST00000510079 1181 ntBASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms