Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.55■□□□□ 0.24
HACD3Q9P035 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HACD3Q9P035 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.55■□□□□ 0.24
HACD3Q9P035 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.55■□□□□ 0.24
HACD3Q9P035 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.55■□□□□ 0.24
HACD3Q9P035 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.55■□□□□ 0.24
HACD3Q9P035 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
HACD3Q9P035 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.55■□□□□ 0.24
HACD3Q9P035 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
HACD3Q9P035 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HACD3Q9P035 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HACD3Q9P035 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HACD3Q9P035 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HACD3Q9P035 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
HACD3Q9P035 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HACD3Q9P035 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.54■□□□□ 0.24
HACD3Q9P035 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.54■□□□□ 0.24
HACD3Q9P035 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
HACD3Q9P035 CICP6-201ENST00000457191 2729 ntBASIC16.54■□□□□ 0.24
HACD3Q9P035 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HACD3Q9P035 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HACD3Q9P035 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.54■□□□□ 0.24
HACD3Q9P035 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.54■□□□□ 0.24
HACD3Q9P035 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.54■□□□□ 0.24
HACD3Q9P035 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HACD3Q9P035 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
HACD3Q9P035 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.54■□□□□ 0.24
HACD3Q9P035 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HACD3Q9P035 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HACD3Q9P035 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HACD3Q9P035 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HACD3Q9P035 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HACD3Q9P035 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HACD3Q9P035 AL355306.1-201ENST00000415580 579 ntBASIC16.54■□□□□ 0.24
HACD3Q9P035 AL671277.1-201ENST00000429656 993 ntBASIC16.54■□□□□ 0.24
HACD3Q9P035 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.54■□□□□ 0.24
HACD3Q9P035 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.54■□□□□ 0.24
HACD3Q9P035 RN7SL589P-201ENST00000481268 310 ntBASIC16.54■□□□□ 0.24
HACD3Q9P035 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HACD3Q9P035 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
HACD3Q9P035 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
HACD3Q9P035 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
HACD3Q9P035 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HACD3Q9P035 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
HACD3Q9P035 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
HACD3Q9P035 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HACD3Q9P035 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HACD3Q9P035 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
HACD3Q9P035 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
HACD3Q9P035 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
HACD3Q9P035 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
HACD3Q9P035 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
HACD3Q9P035 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HACD3Q9P035 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HACD3Q9P035 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HACD3Q9P035 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.54■□□□□ 0.24
HACD3Q9P035 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HACD3Q9P035 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HACD3Q9P035 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HACD3Q9P035 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.54■□□□□ 0.24
HACD3Q9P035 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.54■□□□□ 0.24
HACD3Q9P035 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.54■□□□□ 0.24
HACD3Q9P035 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HACD3Q9P035 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.53■□□□□ 0.24
HACD3Q9P035 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HACD3Q9P035 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HACD3Q9P035 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.53■□□□□ 0.24
HACD3Q9P035 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HACD3Q9P035 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.53■□□□□ 0.24
HACD3Q9P035 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HACD3Q9P035 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HACD3Q9P035 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.53■□□□□ 0.24
HACD3Q9P035 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.53■□□□□ 0.24
HACD3Q9P035 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HACD3Q9P035 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
HACD3Q9P035 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
HACD3Q9P035 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.53■□□□□ 0.24
HACD3Q9P035 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.53■□□□□ 0.24
HACD3Q9P035 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.53■□□□□ 0.24
HACD3Q9P035 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.53■□□□□ 0.24
HACD3Q9P035 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.53■□□□□ 0.24
HACD3Q9P035 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.53■□□□□ 0.24
HACD3Q9P035 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HACD3Q9P035 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.53■□□□□ 0.24
HACD3Q9P035 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.53■□□□□ 0.24
HACD3Q9P035 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.53■□□□□ 0.24
HACD3Q9P035 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
HACD3Q9P035 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HACD3Q9P035 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.53■□□□□ 0.24
HACD3Q9P035 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
HACD3Q9P035 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.53■□□□□ 0.24
HACD3Q9P035 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.53■□□□□ 0.24
HACD3Q9P035 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HACD3Q9P035 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
HACD3Q9P035 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.53■□□□□ 0.24
HACD3Q9P035 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HACD3Q9P035 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HACD3Q9P035 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HACD3Q9P035 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
HACD3Q9P035 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms