Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 AC012485.1-201ENST00000456601 2509 ntTSL 2 BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 IDNK-203ENST00000405990 629 ntTSL 2 BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 NME1-207ENST00000480143 964 ntTSL 2 BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 EEF1DP3-203ENST00000566025 782 ntBASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 GXYLT1P5-201ENST00000614548 1189 ntBASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 ZMPSTE24-201ENST00000372759 3108 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 RNGTT-202ENST00000369485 4553 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 PARP3-202ENST00000417220 2472 ntAPPRIS P3 TSL 5 BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 MYO1C-201ENST00000359786 5145 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 AC011477.6-201ENST00000604980 1927 ntBASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 AOC3-201ENST00000308423 4026 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CDC42SE1Q9NRR8 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 PER1-211ENST00000581082 4521 ntTSL 5 BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 INTS4P1-203ENST00000641008 3683 ntBASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 AC130686.1-201ENST00000622936 2466 ntBASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 ADAM32-206ENST00000519315 2168 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 YTHDC1-201ENST00000344157 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 AP006261.1-201ENST00000584783 668 ntBASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 DOCK4-204ENST00000428084 7997 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC8.24□□□□□ -1.09
CDC42SE1Q9NRR8 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms