Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
PRDM9Q9NQV7 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PRDM9Q9NQV7 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PRDM9Q9NQV7 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.46■□□□□ 0.07
PRDM9Q9NQV7 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PRDM9Q9NQV7 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
PRDM9Q9NQV7 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PRDM9Q9NQV7 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PRDM9Q9NQV7 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.46■□□□□ 0.07
PRDM9Q9NQV7 MIR346-201ENST00000362234 95 ntBASIC15.46■□□□□ 0.07
PRDM9Q9NQV7 MIR648-201ENST00000385046 94 ntBASIC15.46■□□□□ 0.07
PRDM9Q9NQV7 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.46■□□□□ 0.07
PRDM9Q9NQV7 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.46■□□□□ 0.07
PRDM9Q9NQV7 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.46■□□□□ 0.07
PRDM9Q9NQV7 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.46■□□□□ 0.07
PRDM9Q9NQV7 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.46■□□□□ 0.07
PRDM9Q9NQV7 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.46■□□□□ 0.07
PRDM9Q9NQV7 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PRDM9Q9NQV7 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.46■□□□□ 0.07
PRDM9Q9NQV7 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.46■□□□□ 0.07
PRDM9Q9NQV7 AC093520.2-201ENST00000561830 333 ntBASIC15.46■□□□□ 0.07
PRDM9Q9NQV7 AP000842.3-202ENST00000569238 1080 ntBASIC15.46■□□□□ 0.07
PRDM9Q9NQV7 AC009093.7-201ENST00000623853 1223 ntBASIC15.46■□□□□ 0.07
PRDM9Q9NQV7 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.46■□□□□ 0.07
PRDM9Q9NQV7 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PRDM9Q9NQV7 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PRDM9Q9NQV7 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PRDM9Q9NQV7 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
PRDM9Q9NQV7 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.46■□□□□ 0.07
PRDM9Q9NQV7 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PRDM9Q9NQV7 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.46■□□□□ 0.07
PRDM9Q9NQV7 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.46■□□□□ 0.07
PRDM9Q9NQV7 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PRDM9Q9NQV7 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
PRDM9Q9NQV7 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.46■□□□□ 0.06
PRDM9Q9NQV7 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
PRDM9Q9NQV7 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.46■□□□□ 0.06
PRDM9Q9NQV7 REXO1L8P-201ENST00000604378 1897 ntBASIC15.46■□□□□ 0.06
PRDM9Q9NQV7 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
PRDM9Q9NQV7 PCDHB19P-201ENST00000570871 2371 ntBASIC15.46■□□□□ 0.06
PRDM9Q9NQV7 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
PRDM9Q9NQV7 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.45■□□□□ 0.06
PRDM9Q9NQV7 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.45■□□□□ 0.06
PRDM9Q9NQV7 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PRDM9Q9NQV7 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PRDM9Q9NQV7 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.45■□□□□ 0.06
PRDM9Q9NQV7 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.45■□□□□ 0.06
PRDM9Q9NQV7 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PRDM9Q9NQV7 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PRDM9Q9NQV7 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PRDM9Q9NQV7 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PRDM9Q9NQV7 AL596257.1-201ENST00000641463 2694 ntBASIC15.45■□□□□ 0.06
PRDM9Q9NQV7 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PRDM9Q9NQV7 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PRDM9Q9NQV7 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.45■□□□□ 0.06
PRDM9Q9NQV7 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PRDM9Q9NQV7 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
PRDM9Q9NQV7 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PRDM9Q9NQV7 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PRDM9Q9NQV7 AL513523.2-202ENST00000427283 2040 ntBASIC15.45■□□□□ 0.06
PRDM9Q9NQV7 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.45■□□□□ 0.06
PRDM9Q9NQV7 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.45■□□□□ 0.06
PRDM9Q9NQV7 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.45■□□□□ 0.06
PRDM9Q9NQV7 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PRDM9Q9NQV7 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.45■□□□□ 0.06
PRDM9Q9NQV7 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PRDM9Q9NQV7 AC092183.1-201ENST00000469884 875 ntBASIC15.45■□□□□ 0.06
PRDM9Q9NQV7 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.45■□□□□ 0.06
PRDM9Q9NQV7 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.45■□□□□ 0.06
PRDM9Q9NQV7 AP000240.1-201ENST00000609910 452 ntBASIC15.45■□□□□ 0.06
PRDM9Q9NQV7 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
PRDM9Q9NQV7 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PRDM9Q9NQV7 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
PRDM9Q9NQV7 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.45■□□□□ 0.06
PRDM9Q9NQV7 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PRDM9Q9NQV7 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PRDM9Q9NQV7 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PRDM9Q9NQV7 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PRDM9Q9NQV7 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.45■□□□□ 0.06
PRDM9Q9NQV7 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PRDM9Q9NQV7 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
PRDM9Q9NQV7 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
PRDM9Q9NQV7 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PRDM9Q9NQV7 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PRDM9Q9NQV7 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PRDM9Q9NQV7 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PRDM9Q9NQV7 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
PRDM9Q9NQV7 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PRDM9Q9NQV7 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PRDM9Q9NQV7 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PRDM9Q9NQV7 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.44■□□□□ 0.06
PRDM9Q9NQV7 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PRDM9Q9NQV7 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PRDM9Q9NQV7 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.44■□□□□ 0.06
PRDM9Q9NQV7 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.44■□□□□ 0.06
PRDM9Q9NQV7 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.44■□□□□ 0.06
PRDM9Q9NQV7 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.44■□□□□ 0.06
PRDM9Q9NQV7 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.44■□□□□ 0.06
PRDM9Q9NQV7 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PRDM9Q9NQV7 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms