Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
UPF2Q9HAU5 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC20.11■□□□□ 0.81
UPF2Q9HAU5 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC20.11■□□□□ 0.81
UPF2Q9HAU5 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UPF2Q9HAU5 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
UPF2Q9HAU5 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UPF2Q9HAU5 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
UPF2Q9HAU5 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
UPF2Q9HAU5 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
UPF2Q9HAU5 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.11■□□□□ 0.81
UPF2Q9HAU5 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.11■□□□□ 0.81
UPF2Q9HAU5 AC012615.1-201ENST00000565797 1299 ntBASIC20.11■□□□□ 0.81
UPF2Q9HAU5 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UPF2Q9HAU5 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UPF2Q9HAU5 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
UPF2Q9HAU5 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
UPF2Q9HAU5 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UPF2Q9HAU5 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
UPF2Q9HAU5 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC20.11■□□□□ 0.81
UPF2Q9HAU5 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.11■□□□□ 0.81
UPF2Q9HAU5 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
UPF2Q9HAU5 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UPF2Q9HAU5 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
UPF2Q9HAU5 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UPF2Q9HAU5 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
UPF2Q9HAU5 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UPF2Q9HAU5 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UPF2Q9HAU5 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
UPF2Q9HAU5 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC20.1■□□□□ 0.81
UPF2Q9HAU5 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UPF2Q9HAU5 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UPF2Q9HAU5 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UPF2Q9HAU5 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UPF2Q9HAU5 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC20.1■□□□□ 0.81
UPF2Q9HAU5 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
UPF2Q9HAU5 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
UPF2Q9HAU5 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC20.1■□□□□ 0.81
UPF2Q9HAU5 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
UPF2Q9HAU5 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UPF2Q9HAU5 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC20.1■□□□□ 0.81
UPF2Q9HAU5 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC20.1■□□□□ 0.81
UPF2Q9HAU5 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
UPF2Q9HAU5 STARD13-205ENST00000439831 945 ntTSL 2 BASIC20.1■□□□□ 0.81
UPF2Q9HAU5 AC087641.1-201ENST00000557561 1021 ntBASIC20.1■□□□□ 0.81
UPF2Q9HAU5 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.1■□□□□ 0.81
UPF2Q9HAU5 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.1■□□□□ 0.81
UPF2Q9HAU5 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC20.1■□□□□ 0.81
UPF2Q9HAU5 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC20.1■□□□□ 0.81
UPF2Q9HAU5 AL139288.1-201ENST00000623748 933 ntBASIC20.1■□□□□ 0.81
UPF2Q9HAU5 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC20.1■□□□□ 0.81
UPF2Q9HAU5 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC20.1■□□□□ 0.81
UPF2Q9HAU5 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC20.1■□□□□ 0.81
UPF2Q9HAU5 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC20.1■□□□□ 0.81
UPF2Q9HAU5 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC20.1■□□□□ 0.81
UPF2Q9HAU5 PI4KAP1-204ENST00000612579 1703 ntBASIC20.1■□□□□ 0.81
UPF2Q9HAU5 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC20.1■□□□□ 0.81
UPF2Q9HAU5 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
UPF2Q9HAU5 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UPF2Q9HAU5 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UPF2Q9HAU5 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UPF2Q9HAU5 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UPF2Q9HAU5 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UPF2Q9HAU5 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
UPF2Q9HAU5 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC20.09■□□□□ 0.81
UPF2Q9HAU5 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
UPF2Q9HAU5 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
UPF2Q9HAU5 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UPF2Q9HAU5 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.09■□□□□ 0.81
UPF2Q9HAU5 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
UPF2Q9HAU5 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
UPF2Q9HAU5 FAM86EP-206ENST00000510506 987 ntBASIC20.09■□□□□ 0.81
UPF2Q9HAU5 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.09■□□□□ 0.81
UPF2Q9HAU5 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC20.09■□□□□ 0.81
UPF2Q9HAU5 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
UPF2Q9HAU5 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC20.09■□□□□ 0.81
UPF2Q9HAU5 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
UPF2Q9HAU5 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
UPF2Q9HAU5 AC116407.4-201ENST00000623319 1061 ntBASIC20.09■□□□□ 0.81
UPF2Q9HAU5 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.09■□□□□ 0.81
UPF2Q9HAU5 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC20.09■□□□□ 0.81
UPF2Q9HAU5 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UPF2Q9HAU5 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UPF2Q9HAU5 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UPF2Q9HAU5 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UPF2Q9HAU5 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
UPF2Q9HAU5 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
UPF2Q9HAU5 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
UPF2Q9HAU5 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
UPF2Q9HAU5 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
UPF2Q9HAU5 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
UPF2Q9HAU5 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
UPF2Q9HAU5 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
UPF2Q9HAU5 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
UPF2Q9HAU5 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.81
UPF2Q9HAU5 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
UPF2Q9HAU5 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
UPF2Q9HAU5 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
UPF2Q9HAU5 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
UPF2Q9HAU5 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
UPF2Q9HAU5 SLC22A20-204ENST00000530038 1673 ntBASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms