Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
PIF1Q9H611 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
PIF1Q9H611 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PIF1Q9H611 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.67■□□□□ 0.1
PIF1Q9H611 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PIF1Q9H611 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PIF1Q9H611 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PIF1Q9H611 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.67■□□□□ 0.1
PIF1Q9H611 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PIF1Q9H611 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PIF1Q9H611 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PIF1Q9H611 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.67■□□□□ 0.1
PIF1Q9H611 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
PIF1Q9H611 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.67■□□□□ 0.1
PIF1Q9H611 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.67■□□□□ 0.1
PIF1Q9H611 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.67■□□□□ 0.1
PIF1Q9H611 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PIF1Q9H611 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PIF1Q9H611 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
PIF1Q9H611 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PIF1Q9H611 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PIF1Q9H611 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.66■□□□□ 0.1
PIF1Q9H611 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PIF1Q9H611 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PIF1Q9H611 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PIF1Q9H611 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PIF1Q9H611 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PIF1Q9H611 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.66■□□□□ 0.1
PIF1Q9H611 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
PIF1Q9H611 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.66■□□□□ 0.1
PIF1Q9H611 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PIF1Q9H611 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PIF1Q9H611 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.66■□□□□ 0.1
PIF1Q9H611 MIR600HG-201ENST00000449175 5984 ntBASIC15.66■□□□□ 0.1
PIF1Q9H611 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.66■□□□□ 0.1
PIF1Q9H611 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PIF1Q9H611 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PIF1Q9H611 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PIF1Q9H611 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PIF1Q9H611 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PIF1Q9H611 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PIF1Q9H611 PAWRP1-201ENST00000451083 565 ntBASIC15.66■□□□□ 0.1
PIF1Q9H611 AC087163.2-201ENST00000457299 853 ntBASIC15.66■□□□□ 0.1
PIF1Q9H611 KRT18P56-201ENST00000507275 550 ntBASIC15.66■□□□□ 0.1
PIF1Q9H611 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.66■□□□□ 0.1
PIF1Q9H611 LINC01711-201ENST00000598340 967 ntBASIC15.66■□□□□ 0.1
PIF1Q9H611 AL139424.1-201ENST00000607572 797 ntBASIC15.66■□□□□ 0.1
PIF1Q9H611 AL022326.1-202ENST00000641533 845 ntBASIC15.66■□□□□ 0.1
PIF1Q9H611 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PIF1Q9H611 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
PIF1Q9H611 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
PIF1Q9H611 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PIF1Q9H611 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PIF1Q9H611 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PIF1Q9H611 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.66■□□□□ 0.1
PIF1Q9H611 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.66■□□□□ 0.1
PIF1Q9H611 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
PIF1Q9H611 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.66■□□□□ 0.1
PIF1Q9H611 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PIF1Q9H611 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PIF1Q9H611 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PIF1Q9H611 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PIF1Q9H611 PI4KAP1-204ENST00000612579 1703 ntBASIC15.65■□□□□ 0.1
PIF1Q9H611 AL136379.1-201ENST00000623471 2642 ntBASIC15.65■□□□□ 0.1
PIF1Q9H611 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.65■□□□□ 0.1
PIF1Q9H611 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PIF1Q9H611 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
PIF1Q9H611 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PIF1Q9H611 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PIF1Q9H611 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PIF1Q9H611 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PIF1Q9H611 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PIF1Q9H611 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.65■□□□□ 0.1
PIF1Q9H611 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PIF1Q9H611 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PIF1Q9H611 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PIF1Q9H611 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.65■□□□□ 0.1
PIF1Q9H611 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PIF1Q9H611 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PIF1Q9H611 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PIF1Q9H611 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PIF1Q9H611 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PIF1Q9H611 SLC22A20-204ENST00000530038 1673 ntBASIC15.65■□□□□ 0.1
PIF1Q9H611 AC007326.2-201ENST00000624224 7579 ntBASIC15.65■□□□□ 0.1
PIF1Q9H611 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.65■□□□□ 0.1
PIF1Q9H611 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.65■□□□□ 0.1
PIF1Q9H611 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.65■□□□□ 0.1
PIF1Q9H611 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PIF1Q9H611 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PIF1Q9H611 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PIF1Q9H611 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PIF1Q9H611 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PIF1Q9H611 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
PIF1Q9H611 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
PIF1Q9H611 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PIF1Q9H611 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
PIF1Q9H611 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PIF1Q9H611 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.65■□□□□ 0.1
PIF1Q9H611 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
PIF1Q9H611 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms