Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SALL3Q9BXA9 REXO1L1P-202ENST00000608646 1974 ntBASIC19.67■□□□□ 0.74
SALL3Q9BXA9 AL162727.3-201ENST00000635661 2787 ntBASIC19.67■□□□□ 0.74
SALL3Q9BXA9 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.66■□□□□ 0.74
SALL3Q9BXA9 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC19.66■□□□□ 0.74
SALL3Q9BXA9 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
SALL3Q9BXA9 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
SALL3Q9BXA9 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC19.66■□□□□ 0.74
SALL3Q9BXA9 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SALL3Q9BXA9 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SALL3Q9BXA9 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SALL3Q9BXA9 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SALL3Q9BXA9 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SALL3Q9BXA9 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.66■□□□□ 0.74
SALL3Q9BXA9 AL139010.1-201ENST00000454878 894 ntBASIC19.66■□□□□ 0.74
SALL3Q9BXA9 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.66■□□□□ 0.74
SALL3Q9BXA9 HLA-J-203ENST00000494367 1087 ntBASIC19.66■□□□□ 0.74
SALL3Q9BXA9 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.66■□□□□ 0.74
SALL3Q9BXA9 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
SALL3Q9BXA9 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC19.66■□□□□ 0.74
SALL3Q9BXA9 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.66■□□□□ 0.74
SALL3Q9BXA9 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SALL3Q9BXA9 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SALL3Q9BXA9 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SALL3Q9BXA9 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC19.66■□□□□ 0.74
SALL3Q9BXA9 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC19.66■□□□□ 0.74
SALL3Q9BXA9 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SALL3Q9BXA9 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SALL3Q9BXA9 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
SALL3Q9BXA9 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SALL3Q9BXA9 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SALL3Q9BXA9 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SALL3Q9BXA9 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SALL3Q9BXA9 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC19.65■□□□□ 0.74
SALL3Q9BXA9 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SALL3Q9BXA9 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SALL3Q9BXA9 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SALL3Q9BXA9 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SALL3Q9BXA9 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SALL3Q9BXA9 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SALL3Q9BXA9 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SALL3Q9BXA9 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SALL3Q9BXA9 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SALL3Q9BXA9 RBM39-205ENST00000397370 612 ntTSL 2 BASIC19.65■□□□□ 0.74
SALL3Q9BXA9 SPDYE17-201ENST00000412399 783 ntBASIC19.65■□□□□ 0.74
SALL3Q9BXA9 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC19.65■□□□□ 0.74
SALL3Q9BXA9 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SALL3Q9BXA9 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SALL3Q9BXA9 MIR4313-201ENST00000580760 101 ntBASIC19.65■□□□□ 0.74
SALL3Q9BXA9 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SALL3Q9BXA9 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SALL3Q9BXA9 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.65■□□□□ 0.74
SALL3Q9BXA9 AC097359.3-201ENST00000603982 1210 ntBASIC19.65■□□□□ 0.74
SALL3Q9BXA9 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SALL3Q9BXA9 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SALL3Q9BXA9 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SALL3Q9BXA9 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC19.65■□□□□ 0.74
SALL3Q9BXA9 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SALL3Q9BXA9 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SALL3Q9BXA9 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SALL3Q9BXA9 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SALL3Q9BXA9 FLII-221ENST00000578558 2377 ntTSL 5 BASIC19.65■□□□□ 0.74
SALL3Q9BXA9 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.64■□□□□ 0.74
SALL3Q9BXA9 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SALL3Q9BXA9 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
SALL3Q9BXA9 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
SALL3Q9BXA9 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SALL3Q9BXA9 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC19.64■□□□□ 0.74
SALL3Q9BXA9 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC19.64■□□□□ 0.74
SALL3Q9BXA9 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC19.64■□□□□ 0.74
SALL3Q9BXA9 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SALL3Q9BXA9 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SALL3Q9BXA9 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.64■□□□□ 0.73
SALL3Q9BXA9 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.64■□□□□ 0.73
SALL3Q9BXA9 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SALL3Q9BXA9 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SALL3Q9BXA9 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
SALL3Q9BXA9 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC19.64■□□□□ 0.73
SALL3Q9BXA9 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC19.64■□□□□ 0.73
SALL3Q9BXA9 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC19.64■□□□□ 0.73
SALL3Q9BXA9 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SALL3Q9BXA9 HNRNPUP1-201ENST00000554987 333 ntBASIC19.64■□□□□ 0.73
SALL3Q9BXA9 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC19.64■□□□□ 0.73
SALL3Q9BXA9 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.64■□□□□ 0.73
SALL3Q9BXA9 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SALL3Q9BXA9 KRT8P37-201ENST00000451609 1420 ntBASIC19.64■□□□□ 0.73
SALL3Q9BXA9 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SALL3Q9BXA9 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SALL3Q9BXA9 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SALL3Q9BXA9 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SALL3Q9BXA9 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SALL3Q9BXA9 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SALL3Q9BXA9 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC19.64■□□□□ 0.73
SALL3Q9BXA9 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
SALL3Q9BXA9 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SALL3Q9BXA9 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
SALL3Q9BXA9 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
SALL3Q9BXA9 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
SALL3Q9BXA9 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC19.63■□□□□ 0.73
SALL3Q9BXA9 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms