Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NDUFAF3Q9BU61 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NDUFAF3Q9BU61 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC12.72□□□□□ -0.37
NDUFAF3Q9BU61 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
NDUFAF3Q9BU61 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
NDUFAF3Q9BU61 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
NDUFAF3Q9BU61 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NDUFAF3Q9BU61 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
NDUFAF3Q9BU61 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NDUFAF3Q9BU61 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NDUFAF3Q9BU61 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NDUFAF3Q9BU61 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NDUFAF3Q9BU61 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
NDUFAF3Q9BU61 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NDUFAF3Q9BU61 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NDUFAF3Q9BU61 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NDUFAF3Q9BU61 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC12.72□□□□□ -0.37
NDUFAF3Q9BU61 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
NDUFAF3Q9BU61 TSPY19P-201ENST00000418461 509 ntBASIC12.72□□□□□ -0.37
NDUFAF3Q9BU61 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
NDUFAF3Q9BU61 TSPY18P-201ENST00000441642 509 ntBASIC12.72□□□□□ -0.37
NDUFAF3Q9BU61 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NDUFAF3Q9BU61 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
NDUFAF3Q9BU61 KRT18P31-201ENST00000506277 1292 ntBASIC12.72□□□□□ -0.37
NDUFAF3Q9BU61 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NDUFAF3Q9BU61 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
NDUFAF3Q9BU61 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC12.72□□□□□ -0.37
NDUFAF3Q9BU61 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
NDUFAF3Q9BU61 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC12.72□□□□□ -0.37
NDUFAF3Q9BU61 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
NDUFAF3Q9BU61 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
NDUFAF3Q9BU61 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NDUFAF3Q9BU61 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NDUFAF3Q9BU61 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC12.72□□□□□ -0.37
NDUFAF3Q9BU61 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC12.72□□□□□ -0.37
NDUFAF3Q9BU61 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
NDUFAF3Q9BU61 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NDUFAF3Q9BU61 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
NDUFAF3Q9BU61 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NDUFAF3Q9BU61 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NDUFAF3Q9BU61 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NDUFAF3Q9BU61 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
NDUFAF3Q9BU61 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC12.72□□□□□ -0.37
NDUFAF3Q9BU61 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC12.72□□□□□ -0.37
NDUFAF3Q9BU61 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NDUFAF3Q9BU61 AL161772.1-201ENST00000610494 4412 ntBASIC12.72□□□□□ -0.37
NDUFAF3Q9BU61 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NDUFAF3Q9BU61 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.37
NDUFAF3Q9BU61 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
NDUFAF3Q9BU61 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC12.71□□□□□ -0.37
NDUFAF3Q9BU61 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NDUFAF3Q9BU61 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NDUFAF3Q9BU61 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
NDUFAF3Q9BU61 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NDUFAF3Q9BU61 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC12.71□□□□□ -0.37
NDUFAF3Q9BU61 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NDUFAF3Q9BU61 PPT1-215ENST00000641471 2368 ntBASIC12.71□□□□□ -0.37
NDUFAF3Q9BU61 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC12.71□□□□□ -0.37
NDUFAF3Q9BU61 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
NDUFAF3Q9BU61 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NDUFAF3Q9BU61 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NDUFAF3Q9BU61 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
NDUFAF3Q9BU61 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC12.71□□□□□ -0.37
NDUFAF3Q9BU61 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NDUFAF3Q9BU61 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC12.71□□□□□ -0.37
NDUFAF3Q9BU61 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
NDUFAF3Q9BU61 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NDUFAF3Q9BU61 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
NDUFAF3Q9BU61 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NDUFAF3Q9BU61 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NDUFAF3Q9BU61 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC12.71□□□□□ -0.37
NDUFAF3Q9BU61 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NDUFAF3Q9BU61 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC12.71□□□□□ -0.37
NDUFAF3Q9BU61 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC12.71□□□□□ -0.37
NDUFAF3Q9BU61 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC12.71□□□□□ -0.37
NDUFAF3Q9BU61 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
NDUFAF3Q9BU61 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC12.71□□□□□ -0.37
NDUFAF3Q9BU61 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC12.71□□□□□ -0.37
NDUFAF3Q9BU61 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC12.71□□□□□ -0.37
NDUFAF3Q9BU61 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC12.71□□□□□ -0.37
NDUFAF3Q9BU61 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC12.71□□□□□ -0.37
NDUFAF3Q9BU61 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NDUFAF3Q9BU61 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NDUFAF3Q9BU61 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
NDUFAF3Q9BU61 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC12.71□□□□□ -0.38
NDUFAF3Q9BU61 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
NDUFAF3Q9BU61 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
NDUFAF3Q9BU61 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
NDUFAF3Q9BU61 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC12.71□□□□□ -0.38
NDUFAF3Q9BU61 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
NDUFAF3Q9BU61 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
NDUFAF3Q9BU61 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC12.71□□□□□ -0.38
NDUFAF3Q9BU61 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC12.71□□□□□ -0.38
NDUFAF3Q9BU61 AC118758.2-201ENST00000614242 2813 ntBASIC12.7□□□□□ -0.38
NDUFAF3Q9BU61 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFAF3Q9BU61 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
NDUFAF3Q9BU61 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
NDUFAF3Q9BU61 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
NDUFAF3Q9BU61 REXO1L11P-201ENST00000620964 1927 ntBASIC12.7□□□□□ -0.38
NDUFAF3Q9BU61 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms