Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL13Q99616 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CCL13Q99616 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.69□□□□□ -0.22
CCL13Q99616 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CCL13Q99616 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CCL13Q99616 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL13Q99616 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL13Q99616 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
CCL13Q99616 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.69□□□□□ -0.22
CCL13Q99616 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.69□□□□□ -0.22
CCL13Q99616 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL13Q99616 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CCL13Q99616 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL13Q99616 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CCL13Q99616 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC13.68□□□□□ -0.22
CCL13Q99616 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC13.68□□□□□ -0.22
CCL13Q99616 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CCL13Q99616 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCL13Q99616 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CCL13Q99616 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CCL13Q99616 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CCL13Q99616 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL13Q99616 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCL13Q99616 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.68□□□□□ -0.22
CCL13Q99616 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.68□□□□□ -0.22
CCL13Q99616 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.68□□□□□ -0.22
CCL13Q99616 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.68□□□□□ -0.22
CCL13Q99616 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.68□□□□□ -0.22
CCL13Q99616 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
CCL13Q99616 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCL13Q99616 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCL13Q99616 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.68□□□□□ -0.22
CCL13Q99616 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.68□□□□□ -0.22
CCL13Q99616 KRT18P32-201ENST00000424695 1287 ntBASIC13.68□□□□□ -0.22
CCL13Q99616 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC13.68□□□□□ -0.22
CCL13Q99616 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCL13Q99616 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCL13Q99616 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.68□□□□□ -0.22
CCL13Q99616 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL13Q99616 SLC25A39P2-201ENST00000537614 270 ntBASIC13.68□□□□□ -0.22
CCL13Q99616 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL13Q99616 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC13.68□□□□□ -0.22
CCL13Q99616 AC073389.1-201ENST00000595595 795 ntBASIC13.68□□□□□ -0.22
CCL13Q99616 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC13.68□□□□□ -0.22
CCL13Q99616 GPALPP1-207ENST00000611650 899 ntBASIC13.68□□□□□ -0.22
CCL13Q99616 SPTSSB-204ENST00000617024 1292 ntBASIC13.68□□□□□ -0.22
CCL13Q99616 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC13.68□□□□□ -0.22
CCL13Q99616 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL13Q99616 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CCL13Q99616 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL13Q99616 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL13Q99616 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL13Q99616 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.68□□□□□ -0.22
CCL13Q99616 AC006449.5-201ENST00000610658 2098 ntBASIC13.68□□□□□ -0.22
CCL13Q99616 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CCL13Q99616 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL13Q99616 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL13Q99616 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC13.68□□□□□ -0.22
CCL13Q99616 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL13Q99616 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
CCL13Q99616 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CCL13Q99616 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCL13Q99616 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL13Q99616 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL13Q99616 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL13Q99616 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL13Q99616 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
CCL13Q99616 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL13Q99616 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL13Q99616 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC13.67□□□□□ -0.22
CCL13Q99616 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
CCL13Q99616 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.67□□□□□ -0.22
CCL13Q99616 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC13.67□□□□□ -0.22
CCL13Q99616 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL13Q99616 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC13.67□□□□□ -0.22
CCL13Q99616 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CCL13Q99616 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CCL13Q99616 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC13.67□□□□□ -0.22
CCL13Q99616 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL13Q99616 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL13Q99616 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCL13Q99616 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL13Q99616 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL13Q99616 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL13Q99616 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.67□□□□□ -0.22
CCL13Q99616 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.67□□□□□ -0.22
CCL13Q99616 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.67□□□□□ -0.22
CCL13Q99616 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.67□□□□□ -0.22
CCL13Q99616 AL627223.1-201ENST00000416693 442 ntBASIC13.67□□□□□ -0.22
CCL13Q99616 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCL13Q99616 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
CCL13Q99616 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.67□□□□□ -0.22
CCL13Q99616 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.67□□□□□ -0.22
CCL13Q99616 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC13.67□□□□□ -0.22
CCL13Q99616 AC093520.2-201ENST00000561830 333 ntBASIC13.67□□□□□ -0.22
CCL13Q99616 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.67□□□□□ -0.22
CCL13Q99616 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC13.67□□□□□ -0.22
CCL13Q99616 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.67□□□□□ -0.22
CCL13Q99616 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.67□□□□□ -0.22
CCL13Q99616 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms