Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
MUC4Q99102 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
MUC4Q99102 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
MUC4Q99102 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
MUC4Q99102 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
MUC4Q99102 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
MUC4Q99102 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
MUC4Q99102 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
MUC4Q99102 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
MUC4Q99102 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
MUC4Q99102 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC11.96□□□□□ -0.5
MUC4Q99102 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
MUC4Q99102 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC11.96□□□□□ -0.5
MUC4Q99102 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
MUC4Q99102 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
MUC4Q99102 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
MUC4Q99102 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC11.96□□□□□ -0.5
MUC4Q99102 AC087641.1-201ENST00000557561 1021 ntBASIC11.96□□□□□ -0.5
MUC4Q99102 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC11.96□□□□□ -0.5
MUC4Q99102 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
MUC4Q99102 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC11.96□□□□□ -0.5
MUC4Q99102 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
MUC4Q99102 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
MUC4Q99102 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
MUC4Q99102 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC11.96□□□□□ -0.5
MUC4Q99102 AC092384.3-202ENST00000564646 2873 ntBASIC11.96□□□□□ -0.5
MUC4Q99102 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
MUC4Q99102 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
MUC4Q99102 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
MUC4Q99102 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
MUC4Q99102 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
MUC4Q99102 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
MUC4Q99102 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC11.95□□□□□ -0.5
MUC4Q99102 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
MUC4Q99102 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
MUC4Q99102 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
MUC4Q99102 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
MUC4Q99102 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
MUC4Q99102 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
MUC4Q99102 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC11.95□□□□□ -0.5
MUC4Q99102 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
MUC4Q99102 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC11.95□□□□□ -0.5
MUC4Q99102 MRPL20P1-201ENST00000400819 433 ntBASIC11.95□□□□□ -0.5
MUC4Q99102 HCG4-201ENST00000418983 998 ntBASIC11.95□□□□□ -0.5
MUC4Q99102 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
MUC4Q99102 POU5F1P6-201ENST00000466990 990 ntBASIC11.95□□□□□ -0.5
MUC4Q99102 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
MUC4Q99102 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
MUC4Q99102 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC11.95□□□□□ -0.5
MUC4Q99102 AC011467.4-201ENST00000594891 528 ntBASIC11.95□□□□□ -0.5
MUC4Q99102 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
MUC4Q99102 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC11.95□□□□□ -0.5
MUC4Q99102 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
MUC4Q99102 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
MUC4Q99102 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
MUC4Q99102 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
MUC4Q99102 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC11.95□□□□□ -0.5
MUC4Q99102 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
MUC4Q99102 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
MUC4Q99102 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
MUC4Q99102 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
MUC4Q99102 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC11.95□□□□□ -0.5
MUC4Q99102 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC11.95□□□□□ -0.5
MUC4Q99102 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
MUC4Q99102 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC11.95□□□□□ -0.5
MUC4Q99102 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
MUC4Q99102 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
MUC4Q99102 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
MUC4Q99102 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
MUC4Q99102 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
MUC4Q99102 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
MUC4Q99102 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
MUC4Q99102 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
MUC4Q99102 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
MUC4Q99102 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
MUC4Q99102 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
MUC4Q99102 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
MUC4Q99102 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
MUC4Q99102 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
MUC4Q99102 PTCHD3P3-201ENST00000403073 906 ntBASIC11.95□□□□□ -0.5
MUC4Q99102 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC11.95□□□□□ -0.5
MUC4Q99102 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC11.95□□□□□ -0.5
MUC4Q99102 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC11.95□□□□□ -0.5
MUC4Q99102 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC11.95□□□□□ -0.5
MUC4Q99102 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
MUC4Q99102 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC11.95□□□□□ -0.5
MUC4Q99102 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
MUC4Q99102 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
MUC4Q99102 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
MUC4Q99102 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
MUC4Q99102 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
MUC4Q99102 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
MUC4Q99102 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
MUC4Q99102 ACE-203ENST00000413513 2237 ntTSL 2 BASIC11.94□□□□□ -0.5
MUC4Q99102 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
MUC4Q99102 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
MUC4Q99102 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
MUC4Q99102 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
MUC4Q99102 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
MUC4Q99102 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC11.94□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms