Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SPENQ96T58 AC106760.1-201ENST00000508690 800 ntBASIC14.45□□□□□ -0.1
SPENQ96T58 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
SPENQ96T58 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.45□□□□□ -0.1
SPENQ96T58 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.45□□□□□ -0.1
SPENQ96T58 RARRES2P5-201ENST00000564013 466 ntBASIC14.45□□□□□ -0.1
SPENQ96T58 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC14.45□□□□□ -0.1
SPENQ96T58 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPENQ96T58 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.45□□□□□ -0.1
SPENQ96T58 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
SPENQ96T58 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPENQ96T58 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.45□□□□□ -0.1
SPENQ96T58 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC14.45□□□□□ -0.1
SPENQ96T58 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
SPENQ96T58 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPENQ96T58 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.45□□□□□ -0.1
SPENQ96T58 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SPENQ96T58 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.45□□□□□ -0.1
SPENQ96T58 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPENQ96T58 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPENQ96T58 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.45□□□□□ -0.1
SPENQ96T58 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.45□□□□□ -0.1
SPENQ96T58 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.45□□□□□ -0.1
SPENQ96T58 RN7SL560P-201ENST00000577943 264 ntBASIC14.45□□□□□ -0.1
SPENQ96T58 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SPENQ96T58 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC14.45□□□□□ -0.1
SPENQ96T58 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPENQ96T58 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SPENQ96T58 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
SPENQ96T58 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
SPENQ96T58 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
SPENQ96T58 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPENQ96T58 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPENQ96T58 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPENQ96T58 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.44□□□□□ -0.1
SPENQ96T58 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.44□□□□□ -0.1
SPENQ96T58 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC14.44□□□□□ -0.1
SPENQ96T58 REEP1-202ENST00000453231 940 ntTSL 2 BASIC14.44□□□□□ -0.1
SPENQ96T58 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.44□□□□□ -0.1
SPENQ96T58 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.44□□□□□ -0.1
SPENQ96T58 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.44□□□□□ -0.1
SPENQ96T58 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
SPENQ96T58 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPENQ96T58 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.44□□□□□ -0.1
SPENQ96T58 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPENQ96T58 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPENQ96T58 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.44□□□□□ -0.1
SPENQ96T58 REXO1L8P-201ENST00000604378 1897 ntBASIC14.44□□□□□ -0.1
SPENQ96T58 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SPENQ96T58 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.44□□□□□ -0.1
SPENQ96T58 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.44□□□□□ -0.1
SPENQ96T58 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.44□□□□□ -0.1
SPENQ96T58 AC124947.2-201ENST00000547118 1133 ntBASIC14.44□□□□□ -0.1
SPENQ96T58 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.44□□□□□ -0.1
SPENQ96T58 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.44□□□□□ -0.1
SPENQ96T58 CU634019.7-201ENST00000624153 1185 ntBASIC14.44□□□□□ -0.1
SPENQ96T58 FP236241.2-201ENST00000624906 1185 ntBASIC14.44□□□□□ -0.1
SPENQ96T58 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC14.44□□□□□ -0.1
SPENQ96T58 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.44□□□□□ -0.1
SPENQ96T58 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SPENQ96T58 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPENQ96T58 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.44□□□□□ -0.1
SPENQ96T58 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPENQ96T58 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPENQ96T58 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPENQ96T58 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SPENQ96T58 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SPENQ96T58 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
SPENQ96T58 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.44□□□□□ -0.1
SPENQ96T58 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPENQ96T58 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.44□□□□□ -0.1
SPENQ96T58 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
SPENQ96T58 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPENQ96T58 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPENQ96T58 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
SPENQ96T58 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPENQ96T58 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPENQ96T58 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
SPENQ96T58 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPENQ96T58 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SPENQ96T58 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SPENQ96T58 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPENQ96T58 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.43□□□□□ -0.1
SPENQ96T58 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPENQ96T58 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.43□□□□□ -0.1
SPENQ96T58 AC106886.4-201ENST00000623557 2502 ntBASIC14.43□□□□□ -0.1
SPENQ96T58 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPENQ96T58 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.43□□□□□ -0.1
SPENQ96T58 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPENQ96T58 KRT43P-201ENST00000434019 910 ntBASIC14.43□□□□□ -0.1
SPENQ96T58 RPS2P36-201ENST00000456516 831 ntBASIC14.43□□□□□ -0.1
SPENQ96T58 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SPENQ96T58 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC14.43□□□□□ -0.1
SPENQ96T58 TIMM17BP1-201ENST00000545713 516 ntBASIC14.43□□□□□ -0.1
SPENQ96T58 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.43□□□□□ -0.1
SPENQ96T58 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SPENQ96T58 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC14.43□□□□□ -0.1
SPENQ96T58 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC14.43□□□□□ -0.1
SPENQ96T58 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPENQ96T58 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms