Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 NKG7-205ENST00000600427 520 ntTSL 3 BASIC19.3■□□□□ 0.68
NEK1Q96PY6 SPDYE10P-202ENST00000612005 668 ntBASIC19.3■□□□□ 0.68
NEK1Q96PY6 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
NEK1Q96PY6 SPDYE8P-202ENST00000612377 668 ntBASIC19.3■□□□□ 0.68
NEK1Q96PY6 SPTSSB-204ENST00000617024 1292 ntBASIC19.3■□□□□ 0.68
NEK1Q96PY6 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NEK1Q96PY6 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NEK1Q96PY6 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC19.3■□□□□ 0.68
NEK1Q96PY6 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NEK1Q96PY6 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NEK1Q96PY6 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NEK1Q96PY6 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC19.3■□□□□ 0.68
NEK1Q96PY6 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NEK1Q96PY6 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC19.3■□□□□ 0.68
NEK1Q96PY6 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
NEK1Q96PY6 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
NEK1Q96PY6 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NEK1Q96PY6 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NEK1Q96PY6 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NEK1Q96PY6 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
NEK1Q96PY6 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NEK1Q96PY6 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.29■□□□□ 0.68
NEK1Q96PY6 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
NEK1Q96PY6 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
NEK1Q96PY6 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
NEK1Q96PY6 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NEK1Q96PY6 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NEK1Q96PY6 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.29■□□□□ 0.68
NEK1Q96PY6 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NEK1Q96PY6 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NEK1Q96PY6 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NEK1Q96PY6 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NEK1Q96PY6 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.29■□□□□ 0.68
NEK1Q96PY6 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NEK1Q96PY6 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NEK1Q96PY6 SPCS2P4-201ENST00000436160 681 ntBASIC19.29■□□□□ 0.68
NEK1Q96PY6 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.29■□□□□ 0.68
NEK1Q96PY6 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC19.29■□□□□ 0.68
NEK1Q96PY6 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.29■□□□□ 0.68
NEK1Q96PY6 AC098859.1-201ENST00000502915 1238 ntBASIC19.29■□□□□ 0.68
NEK1Q96PY6 AC079140.1-201ENST00000508039 487 ntBASIC19.29■□□□□ 0.68
NEK1Q96PY6 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.29■□□□□ 0.68
NEK1Q96PY6 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.29■□□□□ 0.68
NEK1Q96PY6 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.29■□□□□ 0.68
NEK1Q96PY6 LINC01225-203ENST00000563550 1244 ntBASIC19.29■□□□□ 0.68
NEK1Q96PY6 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.29■□□□□ 0.68
NEK1Q96PY6 MIR4321-201ENST00000592276 80 ntBASIC19.29■□□□□ 0.68
NEK1Q96PY6 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NEK1Q96PY6 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NEK1Q96PY6 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC19.29■□□□□ 0.68
NEK1Q96PY6 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NEK1Q96PY6 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC19.29■□□□□ 0.68
NEK1Q96PY6 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
NEK1Q96PY6 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC19.29■□□□□ 0.68
NEK1Q96PY6 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC19.29■□□□□ 0.68
NEK1Q96PY6 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.29■□□□□ 0.68
NEK1Q96PY6 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NEK1Q96PY6 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NEK1Q96PY6 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NEK1Q96PY6 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NEK1Q96PY6 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
NEK1Q96PY6 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
NEK1Q96PY6 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
NEK1Q96PY6 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
NEK1Q96PY6 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
NEK1Q96PY6 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
NEK1Q96PY6 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC19.28■□□□□ 0.68
NEK1Q96PY6 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
NEK1Q96PY6 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC19.28■□□□□ 0.68
NEK1Q96PY6 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NEK1Q96PY6 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
NEK1Q96PY6 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC19.28■□□□□ 0.68
NEK1Q96PY6 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC19.28■□□□□ 0.68
NEK1Q96PY6 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NEK1Q96PY6 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.28■□□□□ 0.68
NEK1Q96PY6 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NEK1Q96PY6 AC142381.1-201ENST00000426099 345 ntBASIC19.28■□□□□ 0.68
NEK1Q96PY6 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.28■□□□□ 0.68
NEK1Q96PY6 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.28■□□□□ 0.68
NEK1Q96PY6 AC005829.1-201ENST00000570002 483 ntBASIC19.28■□□□□ 0.68
NEK1Q96PY6 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC19.28■□□□□ 0.68
NEK1Q96PY6 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
NEK1Q96PY6 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.28■□□□□ 0.68
NEK1Q96PY6 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
NEK1Q96PY6 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.28■□□□□ 0.68
NEK1Q96PY6 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC19.28■□□□□ 0.68
NEK1Q96PY6 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
NEK1Q96PY6 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC19.28■□□□□ 0.68
NEK1Q96PY6 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NEK1Q96PY6 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NEK1Q96PY6 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NEK1Q96PY6 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NEK1Q96PY6 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NEK1Q96PY6 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC19.28■□□□□ 0.68
NEK1Q96PY6 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC19.28■□□□□ 0.68
NEK1Q96PY6 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC19.28■□□□□ 0.68
NEK1Q96PY6 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NEK1Q96PY6 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC19.28■□□□□ 0.68
NEK1Q96PY6 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC19.28■□□□□ 0.68
NEK1Q96PY6 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms