Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 SPDYE18-201ENST00000510091 1050 ntBASIC18.47■□□□□ 0.55
SYNGAP1Q96PV0 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.47■□□□□ 0.55
SYNGAP1Q96PV0 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SYNGAP1Q96PV0 POLE2-203ENST00000553805 496 ntTSL 2 BASIC18.47■□□□□ 0.55
SYNGAP1Q96PV0 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.47■□□□□ 0.55
SYNGAP1Q96PV0 MIR6799-201ENST00000620297 69 ntBASIC18.47■□□□□ 0.55
SYNGAP1Q96PV0 IGHV3-72-202ENST00000621503 303 ntBASIC18.47■□□□□ 0.55
SYNGAP1Q96PV0 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.47■□□□□ 0.55
SYNGAP1Q96PV0 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.47■□□□□ 0.55
SYNGAP1Q96PV0 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.47■□□□□ 0.55
SYNGAP1Q96PV0 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SYNGAP1Q96PV0 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.47■□□□□ 0.55
SYNGAP1Q96PV0 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.47■□□□□ 0.55
SYNGAP1Q96PV0 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SYNGAP1Q96PV0 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.46■□□□□ 0.55
SYNGAP1Q96PV0 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SYNGAP1Q96PV0 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.46■□□□□ 0.55
SYNGAP1Q96PV0 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.46■□□□□ 0.55
SYNGAP1Q96PV0 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.46■□□□□ 0.55
SYNGAP1Q96PV0 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SYNGAP1Q96PV0 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SYNGAP1Q96PV0 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.46■□□□□ 0.55
SYNGAP1Q96PV0 AC006538.1-201ENST00000567905 1585 ntBASIC18.46■□□□□ 0.55
SYNGAP1Q96PV0 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SYNGAP1Q96PV0 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SYNGAP1Q96PV0 SLC7A15P-201ENST00000424028 1363 ntBASIC18.46■□□□□ 0.55
SYNGAP1Q96PV0 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SYNGAP1Q96PV0 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SYNGAP1Q96PV0 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.46■□□□□ 0.55
SYNGAP1Q96PV0 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SYNGAP1Q96PV0 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SYNGAP1Q96PV0 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SYNGAP1Q96PV0 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SYNGAP1Q96PV0 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SYNGAP1Q96PV0 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
SYNGAP1Q96PV0 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SYNGAP1Q96PV0 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SYNGAP1Q96PV0 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SYNGAP1Q96PV0 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
SYNGAP1Q96PV0 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SYNGAP1Q96PV0 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.46■□□□□ 0.55
SYNGAP1Q96PV0 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.55
SYNGAP1Q96PV0 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SYNGAP1Q96PV0 INE1-201ENST00000456273 945 ntBASIC18.46■□□□□ 0.55
SYNGAP1Q96PV0 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.46■□□□□ 0.55
SYNGAP1Q96PV0 SDHAP3-202ENST00000515467 728 ntBASIC18.46■□□□□ 0.55
SYNGAP1Q96PV0 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SYNGAP1Q96PV0 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SYNGAP1Q96PV0 CHCHD2P3-201ENST00000603038 451 ntBASIC18.46■□□□□ 0.55
SYNGAP1Q96PV0 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SYNGAP1Q96PV0 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
SYNGAP1Q96PV0 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.54
SYNGAP1Q96PV0 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
SYNGAP1Q96PV0 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.45■□□□□ 0.54
SYNGAP1Q96PV0 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SYNGAP1Q96PV0 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.45■□□□□ 0.54
SYNGAP1Q96PV0 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SYNGAP1Q96PV0 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.45■□□□□ 0.54
SYNGAP1Q96PV0 RNF216P1-203ENST00000404404 2427 ntBASIC18.45■□□□□ 0.54
SYNGAP1Q96PV0 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SYNGAP1Q96PV0 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SYNGAP1Q96PV0 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.45■□□□□ 0.54
SYNGAP1Q96PV0 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.45■□□□□ 0.54
SYNGAP1Q96PV0 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SYNGAP1Q96PV0 AC078925.2-201ENST00000624013 1973 ntBASIC18.45■□□□□ 0.54
SYNGAP1Q96PV0 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SYNGAP1Q96PV0 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
SYNGAP1Q96PV0 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SYNGAP1Q96PV0 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SYNGAP1Q96PV0 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SYNGAP1Q96PV0 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.45■□□□□ 0.54
SYNGAP1Q96PV0 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SYNGAP1Q96PV0 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SYNGAP1Q96PV0 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SYNGAP1Q96PV0 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SYNGAP1Q96PV0 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SYNGAP1Q96PV0 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
SYNGAP1Q96PV0 AL512384.1-201ENST00000406683 331 ntBASIC18.45■□□□□ 0.54
SYNGAP1Q96PV0 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.45■□□□□ 0.54
SYNGAP1Q96PV0 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC18.45■□□□□ 0.54
SYNGAP1Q96PV0 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SYNGAP1Q96PV0 RN7SL752P-201ENST00000463779 287 ntBASIC18.45■□□□□ 0.54
SYNGAP1Q96PV0 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SYNGAP1Q96PV0 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SYNGAP1Q96PV0 AC055876.2-201ENST00000531834 546 ntBASIC18.45■□□□□ 0.54
SYNGAP1Q96PV0 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.45■□□□□ 0.54
SYNGAP1Q96PV0 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC18.45■□□□□ 0.54
SYNGAP1Q96PV0 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.45■□□□□ 0.54
SYNGAP1Q96PV0 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC18.45■□□□□ 0.54
SYNGAP1Q96PV0 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.45■□□□□ 0.54
SYNGAP1Q96PV0 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.45■□□□□ 0.54
SYNGAP1Q96PV0 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC18.45■□□□□ 0.54
SYNGAP1Q96PV0 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.45■□□□□ 0.54
SYNGAP1Q96PV0 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SYNGAP1Q96PV0 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SYNGAP1Q96PV0 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SYNGAP1Q96PV0 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SYNGAP1Q96PV0 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SYNGAP1Q96PV0 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SYNGAP1Q96PV0 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms