Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNX27Q96L92 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SNX27Q96L92 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.54■□□□□ 0.4
SNX27Q96L92 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNX27Q96L92 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNX27Q96L92 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
SNX27Q96L92 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SNX27Q96L92 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
SNX27Q96L92 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.54■□□□□ 0.4
SNX27Q96L92 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.54■□□□□ 0.4
SNX27Q96L92 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SNX27Q96L92 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNX27Q96L92 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.54■□□□□ 0.4
SNX27Q96L92 KRT17P7-201ENST00000451704 1104 ntBASIC17.54■□□□□ 0.4
SNX27Q96L92 AL512638.1-201ENST00000457493 794 ntBASIC17.54■□□□□ 0.4
SNX27Q96L92 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.54■□□□□ 0.4
SNX27Q96L92 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.54■□□□□ 0.4
SNX27Q96L92 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.54■□□□□ 0.4
SNX27Q96L92 FAM8A2P-201ENST00000528813 1142 ntBASIC17.54■□□□□ 0.4
SNX27Q96L92 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.54■□□□□ 0.4
SNX27Q96L92 TMEM261P1-201ENST00000604899 340 ntBASIC17.54■□□□□ 0.4
SNX27Q96L92 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
SNX27Q96L92 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SNX27Q96L92 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SNX27Q96L92 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNX27Q96L92 MST1L-201ENST00000442552 2185 ntBASIC17.54■□□□□ 0.4
SNX27Q96L92 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.54■□□□□ 0.4
SNX27Q96L92 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNX27Q96L92 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNX27Q96L92 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.54■□□□□ 0.4
SNX27Q96L92 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SNX27Q96L92 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNX27Q96L92 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
SNX27Q96L92 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNX27Q96L92 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNX27Q96L92 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC17.53■□□□□ 0.4
SNX27Q96L92 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNX27Q96L92 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.53■□□□□ 0.4
SNX27Q96L92 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNX27Q96L92 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SNX27Q96L92 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SNX27Q96L92 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNX27Q96L92 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SNX27Q96L92 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.53■□□□□ 0.4
SNX27Q96L92 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.53■□□□□ 0.4
SNX27Q96L92 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNX27Q96L92 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNX27Q96L92 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNX27Q96L92 MRPS18AP1-201ENST00000414458 589 ntBASIC17.53■□□□□ 0.4
SNX27Q96L92 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.53■□□□□ 0.4
SNX27Q96L92 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.53■□□□□ 0.4
SNX27Q96L92 U91328.1-201ENST00000437528 223 ntBASIC17.53■□□□□ 0.4
SNX27Q96L92 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SNX27Q96L92 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SNX27Q96L92 AL139010.1-201ENST00000454878 894 ntBASIC17.53■□□□□ 0.4
SNX27Q96L92 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.53■□□□□ 0.4
SNX27Q96L92 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.53■□□□□ 0.4
SNX27Q96L92 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.53■□□□□ 0.4
SNX27Q96L92 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC17.53■□□□□ 0.4
SNX27Q96L92 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC17.53■□□□□ 0.4
SNX27Q96L92 AL844908.2-201ENST00000609461 460 ntBASIC17.53■□□□□ 0.4
SNX27Q96L92 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.53■□□□□ 0.4
SNX27Q96L92 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.53■□□□□ 0.4
SNX27Q96L92 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC17.53■□□□□ 0.4
SNX27Q96L92 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNX27Q96L92 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNX27Q96L92 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.53■□□□□ 0.4
SNX27Q96L92 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SNX27Q96L92 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.53■□□□□ 0.4
SNX27Q96L92 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SNX27Q96L92 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SNX27Q96L92 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.52■□□□□ 0.4
SNX27Q96L92 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.52■□□□□ 0.4
SNX27Q96L92 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SNX27Q96L92 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.52■□□□□ 0.4
SNX27Q96L92 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.52■□□□□ 0.4
SNX27Q96L92 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SNX27Q96L92 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
SNX27Q96L92 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNX27Q96L92 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SNX27Q96L92 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNX27Q96L92 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNX27Q96L92 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SNX27Q96L92 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SNX27Q96L92 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SNX27Q96L92 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SNX27Q96L92 SPDYE17-201ENST00000412399 783 ntBASIC17.52■□□□□ 0.4
SNX27Q96L92 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.52■□□□□ 0.4
SNX27Q96L92 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.52■□□□□ 0.4
SNX27Q96L92 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.52■□□□□ 0.4
SNX27Q96L92 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.52■□□□□ 0.4
SNX27Q96L92 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
SNX27Q96L92 AC025048.6-201ENST00000634326 1161 ntBASIC17.52■□□□□ 0.4
SNX27Q96L92 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.52■□□□□ 0.4
SNX27Q96L92 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.52■□□□□ 0.4
SNX27Q96L92 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
SNX27Q96L92 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SNX27Q96L92 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
SNX27Q96L92 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SNX27Q96L92 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms