Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.8■□□□□ 0.28
SCG3Q8WXD2 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.8■□□□□ 0.28
SCG3Q8WXD2 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCG3Q8WXD2 AC104640.1-201ENST00000562617 2109 ntBASIC16.8■□□□□ 0.28
SCG3Q8WXD2 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.8■□□□□ 0.28
SCG3Q8WXD2 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.8■□□□□ 0.28
SCG3Q8WXD2 MIR4492-201ENST00000581627 80 ntBASIC16.8■□□□□ 0.28
SCG3Q8WXD2 MPDU1-223ENST00000582151 728 ntBASIC16.8■□□□□ 0.28
SCG3Q8WXD2 LINC02228-204ENST00000642115 2962 ntBASIC16.8■□□□□ 0.28
SCG3Q8WXD2 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.8■□□□□ 0.28
SCG3Q8WXD2 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCG3Q8WXD2 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCG3Q8WXD2 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.8■□□□□ 0.28
SCG3Q8WXD2 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCG3Q8WXD2 ELL2P1-201ENST00000413990 1906 ntBASIC16.8■□□□□ 0.28
SCG3Q8WXD2 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCG3Q8WXD2 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.8■□□□□ 0.28
SCG3Q8WXD2 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCG3Q8WXD2 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SCG3Q8WXD2 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SCG3Q8WXD2 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCG3Q8WXD2 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCG3Q8WXD2 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SCG3Q8WXD2 AC025580.3-201ENST00000617932 1424 ntBASIC16.79■□□□□ 0.28
SCG3Q8WXD2 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SCG3Q8WXD2 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCG3Q8WXD2 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCG3Q8WXD2 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.79■□□□□ 0.28
SCG3Q8WXD2 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCG3Q8WXD2 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.79■□□□□ 0.28
SCG3Q8WXD2 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCG3Q8WXD2 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.79■□□□□ 0.28
SCG3Q8WXD2 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.79■□□□□ 0.28
SCG3Q8WXD2 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
SCG3Q8WXD2 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.79■□□□□ 0.28
SCG3Q8WXD2 ALG1L5P-201ENST00000482043 771 ntBASIC16.79■□□□□ 0.28
SCG3Q8WXD2 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SCG3Q8WXD2 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.79■□□□□ 0.28
SCG3Q8WXD2 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.79■□□□□ 0.28
SCG3Q8WXD2 OR7E47P-204ENST00000575924 449 ntBASIC16.79■□□□□ 0.28
SCG3Q8WXD2 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.79■□□□□ 0.28
SCG3Q8WXD2 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.79■□□□□ 0.28
SCG3Q8WXD2 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.79■□□□□ 0.28
SCG3Q8WXD2 AL078644.1-201ENST00000609881 752 ntBASIC16.79■□□□□ 0.28
SCG3Q8WXD2 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCG3Q8WXD2 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SCG3Q8WXD2 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SCG3Q8WXD2 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SCG3Q8WXD2 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SCG3Q8WXD2 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SCG3Q8WXD2 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SCG3Q8WXD2 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.79■□□□□ 0.28
SCG3Q8WXD2 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.79■□□□□ 0.28
SCG3Q8WXD2 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.79■□□□□ 0.28
SCG3Q8WXD2 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SCG3Q8WXD2 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.78■□□□□ 0.28
SCG3Q8WXD2 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.78■□□□□ 0.28
SCG3Q8WXD2 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCG3Q8WXD2 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCG3Q8WXD2 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.78■□□□□ 0.28
SCG3Q8WXD2 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SCG3Q8WXD2 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
SCG3Q8WXD2 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SCG3Q8WXD2 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCG3Q8WXD2 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SCG3Q8WXD2 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCG3Q8WXD2 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCG3Q8WXD2 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCG3Q8WXD2 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCG3Q8WXD2 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCG3Q8WXD2 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCG3Q8WXD2 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SCG3Q8WXD2 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCG3Q8WXD2 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SCG3Q8WXD2 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCG3Q8WXD2 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCG3Q8WXD2 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCG3Q8WXD2 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCG3Q8WXD2 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCG3Q8WXD2 AC005412.3-201ENST00000580309 715 ntBASIC16.78■□□□□ 0.28
SCG3Q8WXD2 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SCG3Q8WXD2 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SCG3Q8WXD2 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCG3Q8WXD2 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCG3Q8WXD2 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.78■□□□□ 0.28
SCG3Q8WXD2 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCG3Q8WXD2 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SCG3Q8WXD2 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SCG3Q8WXD2 AL353732.1-201ENST00000569618 1459 ntBASIC16.78■□□□□ 0.28
SCG3Q8WXD2 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SCG3Q8WXD2 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCG3Q8WXD2 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SCG3Q8WXD2 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCG3Q8WXD2 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SCG3Q8WXD2 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.78■□□□□ 0.28
SCG3Q8WXD2 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.78■□□□□ 0.28
SCG3Q8WXD2 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.78■□□□□ 0.28
SCG3Q8WXD2 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SCG3Q8WXD2 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SCG3Q8WXD2 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms