Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CHD5Q8TDI0 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CHD5Q8TDI0 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.33■□□□□ 0.21
CHD5Q8TDI0 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CHD5Q8TDI0 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.33■□□□□ 0.21
CHD5Q8TDI0 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.33■□□□□ 0.21
CHD5Q8TDI0 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.33■□□□□ 0.21
CHD5Q8TDI0 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.33■□□□□ 0.21
CHD5Q8TDI0 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.21
CHD5Q8TDI0 AC092337.1-201ENST00000568699 1129 ntBASIC16.33■□□□□ 0.21
CHD5Q8TDI0 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
CHD5Q8TDI0 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
CHD5Q8TDI0 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CHD5Q8TDI0 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CHD5Q8TDI0 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHD5Q8TDI0 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.33■□□□□ 0.2
CHD5Q8TDI0 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHD5Q8TDI0 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHD5Q8TDI0 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CHD5Q8TDI0 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHD5Q8TDI0 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHD5Q8TDI0 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.33■□□□□ 0.2
CHD5Q8TDI0 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.33■□□□□ 0.2
CHD5Q8TDI0 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
CHD5Q8TDI0 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHD5Q8TDI0 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.33■□□□□ 0.2
CHD5Q8TDI0 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.33■□□□□ 0.2
CHD5Q8TDI0 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
CHD5Q8TDI0 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHD5Q8TDI0 AC136604.1-201ENST00000418535 575 ntBASIC16.33■□□□□ 0.2
CHD5Q8TDI0 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.33■□□□□ 0.2
CHD5Q8TDI0 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHD5Q8TDI0 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHD5Q8TDI0 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.33■□□□□ 0.2
CHD5Q8TDI0 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
CHD5Q8TDI0 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.33■□□□□ 0.2
CHD5Q8TDI0 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.33■□□□□ 0.2
CHD5Q8TDI0 AL033527.5-202ENST00000641632 1098 ntBASIC16.33■□□□□ 0.2
CHD5Q8TDI0 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHD5Q8TDI0 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CHD5Q8TDI0 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHD5Q8TDI0 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.33■□□□□ 0.2
CHD5Q8TDI0 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHD5Q8TDI0 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHD5Q8TDI0 DOC2GP-204ENST00000639052 2548 ntBASIC16.33■□□□□ 0.2
CHD5Q8TDI0 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.32■□□□□ 0.2
CHD5Q8TDI0 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.32■□□□□ 0.2
CHD5Q8TDI0 CDC14C-201ENST00000428251 1719 ntBASIC16.32■□□□□ 0.2
CHD5Q8TDI0 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.32■□□□□ 0.2
CHD5Q8TDI0 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHD5Q8TDI0 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.32■□□□□ 0.2
CHD5Q8TDI0 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHD5Q8TDI0 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHD5Q8TDI0 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.32■□□□□ 0.2
CHD5Q8TDI0 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHD5Q8TDI0 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.32■□□□□ 0.2
CHD5Q8TDI0 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.32■□□□□ 0.2
CHD5Q8TDI0 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHD5Q8TDI0 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHD5Q8TDI0 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.32■□□□□ 0.2
CHD5Q8TDI0 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.32■□□□□ 0.2
CHD5Q8TDI0 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.32■□□□□ 0.2
CHD5Q8TDI0 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.32■□□□□ 0.2
CHD5Q8TDI0 LINC01115-203ENST00000606068 577 ntBASIC16.32■□□□□ 0.2
CHD5Q8TDI0 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.32■□□□□ 0.2
CHD5Q8TDI0 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHD5Q8TDI0 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CHD5Q8TDI0 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.32■□□□□ 0.2
CHD5Q8TDI0 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
CHD5Q8TDI0 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHD5Q8TDI0 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
CHD5Q8TDI0 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHD5Q8TDI0 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.32■□□□□ 0.2
CHD5Q8TDI0 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHD5Q8TDI0 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CHD5Q8TDI0 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.32■□□□□ 0.2
CHD5Q8TDI0 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHD5Q8TDI0 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.32■□□□□ 0.2
CHD5Q8TDI0 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.32■□□□□ 0.2
CHD5Q8TDI0 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHD5Q8TDI0 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CHD5Q8TDI0 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CHD5Q8TDI0 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHD5Q8TDI0 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.31■□□□□ 0.2
CHD5Q8TDI0 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHD5Q8TDI0 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHD5Q8TDI0 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.31■□□□□ 0.2
CHD5Q8TDI0 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHD5Q8TDI0 AC008738.7-201ENST00000609744 511 ntBASIC16.31■□□□□ 0.2
CHD5Q8TDI0 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.31■□□□□ 0.2
CHD5Q8TDI0 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHD5Q8TDI0 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.31■□□□□ 0.2
CHD5Q8TDI0 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHD5Q8TDI0 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.31■□□□□ 0.2
CHD5Q8TDI0 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.31■□□□□ 0.2
CHD5Q8TDI0 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CHD5Q8TDI0 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHD5Q8TDI0 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.31■□□□□ 0.2
CHD5Q8TDI0 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHD5Q8TDI0 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms