Protein–RNA interactions for Protein: Q8TC90

CCER1, Coiled-coil domain-containing glutamate-rich protein 1, humanhuman

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCER1Q8TC90 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
CCER1Q8TC90 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CCER1Q8TC90 INIP-202ENST00000374236 874 ntTSL 2 BASIC24.41■■□□□ 1.5
CCER1Q8TC90 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CCER1Q8TC90 MIR648-201ENST00000385046 94 ntBASIC24.41■■□□□ 1.5
CCER1Q8TC90 EMBP1-201ENST00000458200 901 ntBASIC24.41■■□□□ 1.5
CCER1Q8TC90 MTRF1LP2-201ENST00000506027 1122 ntBASIC24.41■■□□□ 1.5
CCER1Q8TC90 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CCER1Q8TC90 AL160237.2-201ENST00000556165 472 ntBASIC24.41■■□□□ 1.5
CCER1Q8TC90 AC148477.8-201ENST00000624298 468 ntBASIC24.41■■□□□ 1.5
CCER1Q8TC90 AC005593.1-201ENST00000624894 515 ntBASIC24.41■■□□□ 1.5
CCER1Q8TC90 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
CCER1Q8TC90 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
CCER1Q8TC90 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
CCER1Q8TC90 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC24.41■■□□□ 1.5
CCER1Q8TC90 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CCER1Q8TC90 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CCER1Q8TC90 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC24.41■■□□□ 1.5
CCER1Q8TC90 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CCER1Q8TC90 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CCER1Q8TC90 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
CCER1Q8TC90 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC24.4■■□□□ 1.5
CCER1Q8TC90 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
CCER1Q8TC90 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
CCER1Q8TC90 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
CCER1Q8TC90 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CCER1Q8TC90 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC24.4■■□□□ 1.5
CCER1Q8TC90 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
CCER1Q8TC90 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CCER1Q8TC90 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC24.4■■□□□ 1.5
CCER1Q8TC90 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
CCER1Q8TC90 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CCER1Q8TC90 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC24.4■■□□□ 1.5
CCER1Q8TC90 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
CCER1Q8TC90 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CCER1Q8TC90 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CCER1Q8TC90 FAM185BP-201ENST00000443595 716 ntBASIC24.4■■□□□ 1.5
CCER1Q8TC90 AC018712.1-201ENST00000455767 687 ntBASIC24.4■■□□□ 1.5
CCER1Q8TC90 MOK-208ENST00000519058 917 ntTSL 2 BASIC24.4■■□□□ 1.5
CCER1Q8TC90 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC24.4■■□□□ 1.5
CCER1Q8TC90 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC24.4■■□□□ 1.5
CCER1Q8TC90 MIR4515-201ENST00000584082 81 ntBASIC24.4■■□□□ 1.5
CCER1Q8TC90 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CCER1Q8TC90 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CCER1Q8TC90 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CCER1Q8TC90 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CCER1Q8TC90 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
CCER1Q8TC90 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CCER1Q8TC90 AC013268.4-201ENST00000637413 2228 ntBASIC24.39■■□□□ 1.5
CCER1Q8TC90 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.5
CCER1Q8TC90 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CCER1Q8TC90 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.5
CCER1Q8TC90 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CCER1Q8TC90 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CCER1Q8TC90 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC24.39■■□□□ 1.5
CCER1Q8TC90 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CCER1Q8TC90 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CCER1Q8TC90 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
CCER1Q8TC90 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CCER1Q8TC90 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CCER1Q8TC90 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
CCER1Q8TC90 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC24.39■■□□□ 1.49
CCER1Q8TC90 HMGA1P7-201ENST00000406908 502 ntBASIC24.39■■□□□ 1.49
CCER1Q8TC90 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CCER1Q8TC90 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.49
CCER1Q8TC90 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
CCER1Q8TC90 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
CCER1Q8TC90 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC24.39■■□□□ 1.49
CCER1Q8TC90 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CCER1Q8TC90 AC068418.2-201ENST00000577309 3703 ntBASIC24.39■■□□□ 1.49
CCER1Q8TC90 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CCER1Q8TC90 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CCER1Q8TC90 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.49
CCER1Q8TC90 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
CCER1Q8TC90 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCER1Q8TC90 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CCER1Q8TC90 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCER1Q8TC90 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CCER1Q8TC90 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCER1Q8TC90 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCER1Q8TC90 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CCER1Q8TC90 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CCER1Q8TC90 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC24.38■■□□□ 1.49
CCER1Q8TC90 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC24.38■■□□□ 1.49
CCER1Q8TC90 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC24.38■■□□□ 1.49
CCER1Q8TC90 RNU1-129P-201ENST00000384064 167 ntBASIC24.38■■□□□ 1.49
CCER1Q8TC90 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC24.38■■□□□ 1.49
CCER1Q8TC90 U1.21-201ENST00000580816 167 ntBASIC24.38■■□□□ 1.49
CCER1Q8TC90 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC24.38■■□□□ 1.49
CCER1Q8TC90 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC24.38■■□□□ 1.49
CCER1Q8TC90 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCER1Q8TC90 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCER1Q8TC90 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCER1Q8TC90 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC24.38■■□□□ 1.49
CCER1Q8TC90 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
CCER1Q8TC90 ANKRD26P3-201ENST00000454044 2748 ntBASIC24.38■■□□□ 1.49
CCER1Q8TC90 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCER1Q8TC90 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CCER1Q8TC90 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CCER1Q8TC90 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC24.37■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms