Protein–RNA interactions for Protein: Q8TBY8

PMFBP1, Polyamine-modulated factor 1-binding protein 1, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMFBP1Q8TBY8 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PMFBP1Q8TBY8 FAM86MP-201ENST00000340703 885 ntBASIC22.3■■□□□ 1.16
PMFBP1Q8TBY8 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PMFBP1Q8TBY8 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PMFBP1Q8TBY8 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC22.3■■□□□ 1.16
PMFBP1Q8TBY8 AC133552.6-201ENST00000613406 534 ntBASIC22.3■■□□□ 1.16
PMFBP1Q8TBY8 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC22.3■■□□□ 1.16
PMFBP1Q8TBY8 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
PMFBP1Q8TBY8 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PMFBP1Q8TBY8 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
PMFBP1Q8TBY8 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC22.3■■□□□ 1.16
PMFBP1Q8TBY8 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PMFBP1Q8TBY8 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PMFBP1Q8TBY8 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
PMFBP1Q8TBY8 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
PMFBP1Q8TBY8 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC22.3■■□□□ 1.16
PMFBP1Q8TBY8 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
PMFBP1Q8TBY8 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PMFBP1Q8TBY8 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
PMFBP1Q8TBY8 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
PMFBP1Q8TBY8 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
PMFBP1Q8TBY8 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC22.29■■□□□ 1.16
PMFBP1Q8TBY8 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PMFBP1Q8TBY8 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
PMFBP1Q8TBY8 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PMFBP1Q8TBY8 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC22.29■■□□□ 1.16
PMFBP1Q8TBY8 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC22.29■■□□□ 1.16
PMFBP1Q8TBY8 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PMFBP1Q8TBY8 MPV17-208ENST00000405076 603 ntTSL 5 BASIC22.29■■□□□ 1.16
PMFBP1Q8TBY8 RPL28-204ENST00000431533 590 ntTSL 2 BASIC22.29■■□□□ 1.16
PMFBP1Q8TBY8 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC22.29■■□□□ 1.16
PMFBP1Q8TBY8 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
PMFBP1Q8TBY8 RPL28-206ENST00000558752 671 ntTSL 3 BASIC22.29■■□□□ 1.16
PMFBP1Q8TBY8 AP005482.1-201ENST00000563722 1273 ntBASIC22.29■■□□□ 1.16
PMFBP1Q8TBY8 AC074044.1-201ENST00000609673 707 ntBASIC22.29■■□□□ 1.16
PMFBP1Q8TBY8 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
PMFBP1Q8TBY8 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PMFBP1Q8TBY8 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PMFBP1Q8TBY8 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
PMFBP1Q8TBY8 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PMFBP1Q8TBY8 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PMFBP1Q8TBY8 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PMFBP1Q8TBY8 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
PMFBP1Q8TBY8 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PMFBP1Q8TBY8 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
PMFBP1Q8TBY8 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PMFBP1Q8TBY8 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC22.28■■□□□ 1.16
PMFBP1Q8TBY8 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
PMFBP1Q8TBY8 AD000864.1-201ENST00000624076 2295 ntBASIC22.28■■□□□ 1.16
PMFBP1Q8TBY8 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PMFBP1Q8TBY8 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PMFBP1Q8TBY8 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC22.28■■□□□ 1.16
PMFBP1Q8TBY8 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC22.28■■□□□ 1.16
PMFBP1Q8TBY8 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC22.28■■□□□ 1.16
PMFBP1Q8TBY8 PTK7-212ENST00000476760 902 ntTSL 2 BASIC22.28■■□□□ 1.16
PMFBP1Q8TBY8 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC22.28■■□□□ 1.16
PMFBP1Q8TBY8 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC22.28■■□□□ 1.16
PMFBP1Q8TBY8 AC010319.3-201ENST00000597028 470 ntBASIC22.28■■□□□ 1.16
PMFBP1Q8TBY8 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PMFBP1Q8TBY8 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC22.28■■□□□ 1.16
PMFBP1Q8TBY8 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PMFBP1Q8TBY8 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PMFBP1Q8TBY8 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PMFBP1Q8TBY8 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PMFBP1Q8TBY8 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
PMFBP1Q8TBY8 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
PMFBP1Q8TBY8 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
PMFBP1Q8TBY8 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PMFBP1Q8TBY8 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PMFBP1Q8TBY8 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PMFBP1Q8TBY8 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC22.27■■□□□ 1.16
PMFBP1Q8TBY8 PACS1-203ENST00000524815 628 ntTSL 4 BASIC22.27■■□□□ 1.16
PMFBP1Q8TBY8 TIMM17BP1-201ENST00000545713 516 ntBASIC22.27■■□□□ 1.16
PMFBP1Q8TBY8 PAM16-204ENST00000571941 674 ntTSL 3 BASIC22.27■■□□□ 1.16
PMFBP1Q8TBY8 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PMFBP1Q8TBY8 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC22.27■■□□□ 1.16
PMFBP1Q8TBY8 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PMFBP1Q8TBY8 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
PMFBP1Q8TBY8 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC22.27■■□□□ 1.16
PMFBP1Q8TBY8 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PMFBP1Q8TBY8 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.15
PMFBP1Q8TBY8 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
PMFBP1Q8TBY8 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.15
PMFBP1Q8TBY8 AC106820.2-201ENST00000563775 3264 ntBASIC22.26■■□□□ 1.15
PMFBP1Q8TBY8 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
PMFBP1Q8TBY8 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
PMFBP1Q8TBY8 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PMFBP1Q8TBY8 AC060834.1-201ENST00000443027 2032 ntBASIC22.26■■□□□ 1.15
PMFBP1Q8TBY8 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PMFBP1Q8TBY8 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PMFBP1Q8TBY8 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PMFBP1Q8TBY8 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PMFBP1Q8TBY8 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC22.26■■□□□ 1.15
PMFBP1Q8TBY8 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PMFBP1Q8TBY8 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PMFBP1Q8TBY8 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
PMFBP1Q8TBY8 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
PMFBP1Q8TBY8 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PMFBP1Q8TBY8 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC22.26■■□□□ 1.15
PMFBP1Q8TBY8 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms