Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC148Q8NFR7 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
CCDC148Q8NFR7 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC148Q8NFR7 AL627223.1-201ENST00000416693 442 ntBASIC18.82■□□□□ 0.6
CCDC148Q8NFR7 KRT18P32-201ENST00000424695 1287 ntBASIC18.82■□□□□ 0.6
CCDC148Q8NFR7 CNN2P11-201ENST00000429351 262 ntBASIC18.82■□□□□ 0.6
CCDC148Q8NFR7 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CCDC148Q8NFR7 SNHG9-202ENST00000564014 471 ntBASIC18.82■□□□□ 0.6
CCDC148Q8NFR7 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CCDC148Q8NFR7 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CCDC148Q8NFR7 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.82■□□□□ 0.6
CCDC148Q8NFR7 AL365330.1-201ENST00000607459 531 ntBASIC18.82■□□□□ 0.6
CCDC148Q8NFR7 SPTSSB-204ENST00000617024 1292 ntBASIC18.82■□□□□ 0.6
CCDC148Q8NFR7 AL691403.2-201ENST00000618460 490 ntBASIC18.82■□□□□ 0.6
CCDC148Q8NFR7 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC148Q8NFR7 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CCDC148Q8NFR7 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC148Q8NFR7 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC148Q8NFR7 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CCDC148Q8NFR7 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC148Q8NFR7 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC148Q8NFR7 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC148Q8NFR7 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC148Q8NFR7 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC148Q8NFR7 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC148Q8NFR7 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC148Q8NFR7 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC148Q8NFR7 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC148Q8NFR7 OVCH1-AS1-204ENST00000641955 5529 ntBASIC18.81■□□□□ 0.6
CCDC148Q8NFR7 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC148Q8NFR7 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC148Q8NFR7 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC148Q8NFR7 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC148Q8NFR7 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
CCDC148Q8NFR7 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC148Q8NFR7 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CCDC148Q8NFR7 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC148Q8NFR7 FOXO1B-201ENST00000504678 1527 ntBASIC18.81■□□□□ 0.6
CCDC148Q8NFR7 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC148Q8NFR7 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC148Q8NFR7 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
CCDC148Q8NFR7 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC148Q8NFR7 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC148Q8NFR7 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC148Q8NFR7 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.81■□□□□ 0.6
CCDC148Q8NFR7 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC148Q8NFR7 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC148Q8NFR7 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC148Q8NFR7 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC148Q8NFR7 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC148Q8NFR7 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC148Q8NFR7 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC148Q8NFR7 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC148Q8NFR7 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC148Q8NFR7 AC092364.2-201ENST00000596710 2692 ntBASIC18.81■□□□□ 0.6
CCDC148Q8NFR7 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC148Q8NFR7 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC148Q8NFR7 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC148Q8NFR7 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC148Q8NFR7 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC148Q8NFR7 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CCDC148Q8NFR7 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC148Q8NFR7 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CCDC148Q8NFR7 CYP2T1P-202ENST00000641596 2535 ntBASIC18.8■□□□□ 0.6
CCDC148Q8NFR7 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC148Q8NFR7 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC148Q8NFR7 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC148Q8NFR7 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC148Q8NFR7 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CCDC148Q8NFR7 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC148Q8NFR7 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CCDC148Q8NFR7 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC148Q8NFR7 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC148Q8NFR7 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
CCDC148Q8NFR7 AL662844.4-201ENST00000606367 2838 ntBASIC18.8■□□□□ 0.6
CCDC148Q8NFR7 AC079328.2-201ENST00000561241 3354 ntBASIC18.8■□□□□ 0.6
CCDC148Q8NFR7 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC148Q8NFR7 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CCDC148Q8NFR7 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC148Q8NFR7 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC148Q8NFR7 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC148Q8NFR7 DNAJB3-202ENST00000449667 1266 ntBASIC18.8■□□□□ 0.6
CCDC148Q8NFR7 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC148Q8NFR7 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
CCDC148Q8NFR7 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC148Q8NFR7 AC023141.5-201ENST00000458585 616 ntBASIC18.8■□□□□ 0.6
CCDC148Q8NFR7 SLC25A39P2-201ENST00000537614 270 ntBASIC18.8■□□□□ 0.6
CCDC148Q8NFR7 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.8■□□□□ 0.6
CCDC148Q8NFR7 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC148Q8NFR7 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.8■□□□□ 0.6
CCDC148Q8NFR7 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
CCDC148Q8NFR7 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC148Q8NFR7 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.8■□□□□ 0.6
CCDC148Q8NFR7 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC148Q8NFR7 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.8■□□□□ 0.6
CCDC148Q8NFR7 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC148Q8NFR7 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC148Q8NFR7 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.8■□□□□ 0.6
CCDC148Q8NFR7 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC148Q8NFR7 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms