Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.77■□□□□ 0.43
KLHDC9Q8NEP7 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.77■□□□□ 0.43
KLHDC9Q8NEP7 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
KLHDC9Q8NEP7 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
KLHDC9Q8NEP7 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.77■□□□□ 0.43
KLHDC9Q8NEP7 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
KLHDC9Q8NEP7 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
KLHDC9Q8NEP7 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
KLHDC9Q8NEP7 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.76■□□□□ 0.43
KLHDC9Q8NEP7 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
KLHDC9Q8NEP7 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
KLHDC9Q8NEP7 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.76■□□□□ 0.43
KLHDC9Q8NEP7 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
KLHDC9Q8NEP7 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KLHDC9Q8NEP7 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KLHDC9Q8NEP7 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KLHDC9Q8NEP7 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
KLHDC9Q8NEP7 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
KLHDC9Q8NEP7 INTS4P2-202ENST00000614726 2019 ntBASIC17.76■□□□□ 0.43
KLHDC9Q8NEP7 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KLHDC9Q8NEP7 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.76■□□□□ 0.43
KLHDC9Q8NEP7 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.76■□□□□ 0.43
KLHDC9Q8NEP7 KRT18P64-201ENST00000434946 1219 ntBASIC17.76■□□□□ 0.43
KLHDC9Q8NEP7 POU5F1P6-201ENST00000466990 990 ntBASIC17.76■□□□□ 0.43
KLHDC9Q8NEP7 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC17.76■□□□□ 0.43
KLHDC9Q8NEP7 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
KLHDC9Q8NEP7 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KLHDC9Q8NEP7 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC17.76■□□□□ 0.43
KLHDC9Q8NEP7 CLUHP6-201ENST00000580789 941 ntBASIC17.76■□□□□ 0.43
KLHDC9Q8NEP7 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.76■□□□□ 0.43
KLHDC9Q8NEP7 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.76■□□□□ 0.43
KLHDC9Q8NEP7 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
KLHDC9Q8NEP7 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KLHDC9Q8NEP7 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
KLHDC9Q8NEP7 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KLHDC9Q8NEP7 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.76■□□□□ 0.43
KLHDC9Q8NEP7 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
KLHDC9Q8NEP7 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.75■□□□□ 0.43
KLHDC9Q8NEP7 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KLHDC9Q8NEP7 PCDHB18P-201ENST00000524813 2368 ntBASIC17.75■□□□□ 0.43
KLHDC9Q8NEP7 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
KLHDC9Q8NEP7 BNIP3P1-202ENST00000550043 1585 ntBASIC17.75■□□□□ 0.43
KLHDC9Q8NEP7 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.75■□□□□ 0.43
KLHDC9Q8NEP7 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.75■□□□□ 0.43
KLHDC9Q8NEP7 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.75■□□□□ 0.43
KLHDC9Q8NEP7 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.75■□□□□ 0.43
KLHDC9Q8NEP7 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KLHDC9Q8NEP7 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
KLHDC9Q8NEP7 BRWD1P1-201ENST00000401091 371 ntBASIC17.75■□□□□ 0.43
KLHDC9Q8NEP7 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.75■□□□□ 0.43
KLHDC9Q8NEP7 FAM21FP-201ENST00000426241 1131 ntBASIC17.75■□□□□ 0.43
KLHDC9Q8NEP7 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.75■□□□□ 0.43
KLHDC9Q8NEP7 AC007551.1-201ENST00000457394 519 ntBASIC17.75■□□□□ 0.43
KLHDC9Q8NEP7 AC108725.1-201ENST00000495472 409 ntBASIC17.75■□□□□ 0.43
KLHDC9Q8NEP7 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.75■□□□□ 0.43
KLHDC9Q8NEP7 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.75■□□□□ 0.43
KLHDC9Q8NEP7 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.75■□□□□ 0.43
KLHDC9Q8NEP7 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
KLHDC9Q8NEP7 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.75■□□□□ 0.43
KLHDC9Q8NEP7 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KLHDC9Q8NEP7 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.75■□□□□ 0.43
KLHDC9Q8NEP7 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
KLHDC9Q8NEP7 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KLHDC9Q8NEP7 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
KLHDC9Q8NEP7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
KLHDC9Q8NEP7 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.75■□□□□ 0.43
KLHDC9Q8NEP7 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.75■□□□□ 0.43
KLHDC9Q8NEP7 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC17.74■□□□□ 0.43
KLHDC9Q8NEP7 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
KLHDC9Q8NEP7 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
KLHDC9Q8NEP7 AC139713.2-201ENST00000641328 2723 ntBASIC17.74■□□□□ 0.43
KLHDC9Q8NEP7 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
KLHDC9Q8NEP7 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KLHDC9Q8NEP7 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
KLHDC9Q8NEP7 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
KLHDC9Q8NEP7 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
KLHDC9Q8NEP7 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KLHDC9Q8NEP7 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
KLHDC9Q8NEP7 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KLHDC9Q8NEP7 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17.74■□□□□ 0.43
KLHDC9Q8NEP7 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC17.74■□□□□ 0.43
KLHDC9Q8NEP7 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.74■□□□□ 0.43
KLHDC9Q8NEP7 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC17.74■□□□□ 0.43
KLHDC9Q8NEP7 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC17.74■□□□□ 0.43
KLHDC9Q8NEP7 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.74■□□□□ 0.43
KLHDC9Q8NEP7 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC17.74■□□□□ 0.43
KLHDC9Q8NEP7 RPL13AP25-201ENST00000484130 612 ntBASIC17.74■□□□□ 0.43
KLHDC9Q8NEP7 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.74■□□□□ 0.43
KLHDC9Q8NEP7 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC17.74■□□□□ 0.43
KLHDC9Q8NEP7 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
KLHDC9Q8NEP7 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17.74■□□□□ 0.43
KLHDC9Q8NEP7 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.74■□□□□ 0.43
KLHDC9Q8NEP7 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.74■□□□□ 0.43
KLHDC9Q8NEP7 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.74■□□□□ 0.43
KLHDC9Q8NEP7 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
KLHDC9Q8NEP7 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KLHDC9Q8NEP7 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
KLHDC9Q8NEP7 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KLHDC9Q8NEP7 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
KLHDC9Q8NEP7 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms