Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VPS52Q8N1B4 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.71■□□□□ 0.43
VPS52Q8N1B4 PRYP6-201ENST00000514804 343 ntBASIC17.71■□□□□ 0.43
VPS52Q8N1B4 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.71■□□□□ 0.43
VPS52Q8N1B4 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.71■□□□□ 0.43
VPS52Q8N1B4 AC009118.2-201ENST00000613275 655 ntBASIC17.71■□□□□ 0.43
VPS52Q8N1B4 AL138828.2-201ENST00000615812 383 ntBASIC17.71■□□□□ 0.43
VPS52Q8N1B4 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
VPS52Q8N1B4 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
VPS52Q8N1B4 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS52Q8N1B4 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.71■□□□□ 0.43
VPS52Q8N1B4 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS52Q8N1B4 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.71■□□□□ 0.43
VPS52Q8N1B4 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.71■□□□□ 0.43
VPS52Q8N1B4 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
VPS52Q8N1B4 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.71■□□□□ 0.43
VPS52Q8N1B4 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
VPS52Q8N1B4 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS52Q8N1B4 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.71■□□□□ 0.43
VPS52Q8N1B4 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
VPS52Q8N1B4 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.71■□□□□ 0.42
VPS52Q8N1B4 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
VPS52Q8N1B4 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
VPS52Q8N1B4 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
VPS52Q8N1B4 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VPS52Q8N1B4 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VPS52Q8N1B4 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VPS52Q8N1B4 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
VPS52Q8N1B4 AC022144.1-201ENST00000602255 1580 ntBASIC17.7■□□□□ 0.42
VPS52Q8N1B4 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VPS52Q8N1B4 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VPS52Q8N1B4 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VPS52Q8N1B4 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VPS52Q8N1B4 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.7■□□□□ 0.42
VPS52Q8N1B4 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VPS52Q8N1B4 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.7■□□□□ 0.42
VPS52Q8N1B4 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
VPS52Q8N1B4 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VPS52Q8N1B4 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.7■□□□□ 0.42
VPS52Q8N1B4 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VPS52Q8N1B4 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VPS52Q8N1B4 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
VPS52Q8N1B4 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VPS52Q8N1B4 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VPS52Q8N1B4 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VPS52Q8N1B4 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VPS52Q8N1B4 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.7■□□□□ 0.42
VPS52Q8N1B4 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.7■□□□□ 0.42
VPS52Q8N1B4 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.7■□□□□ 0.42
VPS52Q8N1B4 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.7■□□□□ 0.42
VPS52Q8N1B4 AC027307.3-201ENST00000594262 1100 ntBASIC17.7■□□□□ 0.42
VPS52Q8N1B4 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
VPS52Q8N1B4 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.7■□□□□ 0.42
VPS52Q8N1B4 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VPS52Q8N1B4 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
VPS52Q8N1B4 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VPS52Q8N1B4 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VPS52Q8N1B4 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VPS52Q8N1B4 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
VPS52Q8N1B4 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VPS52Q8N1B4 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VPS52Q8N1B4 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.7■□□□□ 0.42
VPS52Q8N1B4 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
VPS52Q8N1B4 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VPS52Q8N1B4 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VPS52Q8N1B4 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VPS52Q8N1B4 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VPS52Q8N1B4 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
VPS52Q8N1B4 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VPS52Q8N1B4 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
VPS52Q8N1B4 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VPS52Q8N1B4 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.69■□□□□ 0.42
VPS52Q8N1B4 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
VPS52Q8N1B4 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.69■□□□□ 0.42
VPS52Q8N1B4 FOXO1B-201ENST00000504678 1527 ntBASIC17.69■□□□□ 0.42
VPS52Q8N1B4 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
VPS52Q8N1B4 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VPS52Q8N1B4 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VPS52Q8N1B4 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.69■□□□□ 0.42
VPS52Q8N1B4 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VPS52Q8N1B4 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VPS52Q8N1B4 GK-202ENST00000378941 458 ntTSL 3 BASIC17.69■□□□□ 0.42
VPS52Q8N1B4 HLA-H-201ENST00000383620 1096 ntBASIC17.69■□□□□ 0.42
VPS52Q8N1B4 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
VPS52Q8N1B4 PIN1P1-201ENST00000412108 996 ntBASIC17.69■□□□□ 0.42
VPS52Q8N1B4 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.69■□□□□ 0.42
VPS52Q8N1B4 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VPS52Q8N1B4 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.69■□□□□ 0.42
VPS52Q8N1B4 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.69■□□□□ 0.42
VPS52Q8N1B4 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.69■□□□□ 0.42
VPS52Q8N1B4 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.69■□□□□ 0.42
VPS52Q8N1B4 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.69■□□□□ 0.42
VPS52Q8N1B4 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.69■□□□□ 0.42
VPS52Q8N1B4 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
VPS52Q8N1B4 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VPS52Q8N1B4 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.69■□□□□ 0.42
VPS52Q8N1B4 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VPS52Q8N1B4 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
VPS52Q8N1B4 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VPS52Q8N1B4 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms