Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
COL27A1Q8IZC6 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
COL27A1Q8IZC6 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.05■□□□□ 0
COL27A1Q8IZC6 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.05■□□□□ 0
COL27A1Q8IZC6 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.05■□□□□ 0
COL27A1Q8IZC6 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
COL27A1Q8IZC6 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.05■□□□□ 0
COL27A1Q8IZC6 DRD5P1-201ENST00000456605 1438 ntBASIC15.05■□□□□ 0
COL27A1Q8IZC6 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
COL27A1Q8IZC6 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
COL27A1Q8IZC6 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
COL27A1Q8IZC6 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.05■□□□□ -0
COL27A1Q8IZC6 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.05■□□□□ -0
COL27A1Q8IZC6 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC15.05■□□□□ -0
COL27A1Q8IZC6 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
COL27A1Q8IZC6 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.05■□□□□ -0
COL27A1Q8IZC6 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
COL27A1Q8IZC6 AL607033.1-201ENST00000623900 1599 ntBASIC15.05■□□□□ -0
COL27A1Q8IZC6 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC15.05■□□□□ -0
COL27A1Q8IZC6 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.05■□□□□ -0
COL27A1Q8IZC6 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
COL27A1Q8IZC6 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
COL27A1Q8IZC6 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.05■□□□□ -0
COL27A1Q8IZC6 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
COL27A1Q8IZC6 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
COL27A1Q8IZC6 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.05■□□□□ -0
COL27A1Q8IZC6 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
COL27A1Q8IZC6 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.05■□□□□ -0
COL27A1Q8IZC6 RPL13AP20-201ENST00000459725 609 ntBASIC15.05■□□□□ -0
COL27A1Q8IZC6 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.05■□□□□ -0
COL27A1Q8IZC6 FAM86HP-204ENST00000513466 959 ntBASIC15.05■□□□□ -0
COL27A1Q8IZC6 AC025279.2-201ENST00000569730 653 ntBASIC15.05■□□□□ -0
COL27A1Q8IZC6 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.05■□□□□ -0
COL27A1Q8IZC6 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
COL27A1Q8IZC6 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.05■□□□□ -0
COL27A1Q8IZC6 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
COL27A1Q8IZC6 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.05■□□□□ -0
COL27A1Q8IZC6 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
COL27A1Q8IZC6 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.05■□□□□ -0
COL27A1Q8IZC6 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
COL27A1Q8IZC6 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.05■□□□□ -0
COL27A1Q8IZC6 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
COL27A1Q8IZC6 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.04■□□□□ -0
COL27A1Q8IZC6 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.04■□□□□ -0
COL27A1Q8IZC6 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
COL27A1Q8IZC6 AC005052.1-201ENST00000625181 2492 ntBASIC15.04■□□□□ -0
COL27A1Q8IZC6 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.04■□□□□ -0
COL27A1Q8IZC6 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC15.04■□□□□ -0
COL27A1Q8IZC6 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.04■□□□□ -0
COL27A1Q8IZC6 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC15.04■□□□□ -0
COL27A1Q8IZC6 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.04■□□□□ -0
COL27A1Q8IZC6 AC007969.1-201ENST00000433675 447 ntBASIC15.04■□□□□ -0
COL27A1Q8IZC6 AC016694.1-201ENST00000434179 700 ntBASIC15.04■□□□□ -0
COL27A1Q8IZC6 AC006033.1-201ENST00000440505 426 ntBASIC15.04■□□□□ -0
COL27A1Q8IZC6 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.04■□□□□ -0
COL27A1Q8IZC6 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.04■□□□□ -0
COL27A1Q8IZC6 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.04■□□□□ -0
COL27A1Q8IZC6 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.04■□□□□ -0
COL27A1Q8IZC6 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.04■□□□□ -0
COL27A1Q8IZC6 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.04■□□□□ -0
COL27A1Q8IZC6 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.04■□□□□ -0
COL27A1Q8IZC6 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
COL27A1Q8IZC6 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
COL27A1Q8IZC6 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
COL27A1Q8IZC6 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC15.04■□□□□ -0
COL27A1Q8IZC6 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.04■□□□□ -0
COL27A1Q8IZC6 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
COL27A1Q8IZC6 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
COL27A1Q8IZC6 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.04■□□□□ -0
COL27A1Q8IZC6 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.03■□□□□ -0
COL27A1Q8IZC6 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
COL27A1Q8IZC6 RNU1-114P-201ENST00000365297 166 ntBASIC15.03■□□□□ -0
COL27A1Q8IZC6 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.03■□□□□ -0
COL27A1Q8IZC6 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.03■□□□□ -0
COL27A1Q8IZC6 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
COL27A1Q8IZC6 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
COL27A1Q8IZC6 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.03■□□□□ -0
COL27A1Q8IZC6 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.03■□□□□ -0
COL27A1Q8IZC6 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.03■□□□□ -0
COL27A1Q8IZC6 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.03■□□□□ -0
COL27A1Q8IZC6 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.03■□□□□ -0
COL27A1Q8IZC6 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC15.03■□□□□ -0
COL27A1Q8IZC6 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.03■□□□□ -0
COL27A1Q8IZC6 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
COL27A1Q8IZC6 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
COL27A1Q8IZC6 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
COL27A1Q8IZC6 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.03■□□□□ -0
COL27A1Q8IZC6 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.03■□□□□ -0
COL27A1Q8IZC6 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
COL27A1Q8IZC6 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
COL27A1Q8IZC6 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.03■□□□□ -0
COL27A1Q8IZC6 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
COL27A1Q8IZC6 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
COL27A1Q8IZC6 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC15.03■□□□□ -0
COL27A1Q8IZC6 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
COL27A1Q8IZC6 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.03■□□□□ -0
COL27A1Q8IZC6 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.03■□□□□ -0
COL27A1Q8IZC6 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.03■□□□□ -0
COL27A1Q8IZC6 AC026410.3-201ENST00000514280 936 ntBASIC15.03■□□□□ -0
COL27A1Q8IZC6 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms