Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.79■□□□□ 0.28
CDKL3Q8IVW4 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
CDKL3Q8IVW4 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDKL3Q8IVW4 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CDKL3Q8IVW4 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.79■□□□□ 0.28
CDKL3Q8IVW4 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CDKL3Q8IVW4 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDKL3Q8IVW4 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDKL3Q8IVW4 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CDKL3Q8IVW4 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.78■□□□□ 0.28
CDKL3Q8IVW4 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.78■□□□□ 0.28
CDKL3Q8IVW4 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CDKL3Q8IVW4 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.78■□□□□ 0.28
CDKL3Q8IVW4 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDKL3Q8IVW4 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CDKL3Q8IVW4 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDKL3Q8IVW4 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDKL3Q8IVW4 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDKL3Q8IVW4 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDKL3Q8IVW4 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
CDKL3Q8IVW4 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.78■□□□□ 0.28
CDKL3Q8IVW4 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDKL3Q8IVW4 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDKL3Q8IVW4 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.78■□□□□ 0.28
CDKL3Q8IVW4 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDKL3Q8IVW4 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CDKL3Q8IVW4 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDKL3Q8IVW4 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDKL3Q8IVW4 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.78■□□□□ 0.28
CDKL3Q8IVW4 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CDKL3Q8IVW4 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDKL3Q8IVW4 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.78■□□□□ 0.28
CDKL3Q8IVW4 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.78■□□□□ 0.28
CDKL3Q8IVW4 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.78■□□□□ 0.28
CDKL3Q8IVW4 PDPK2P-202ENST00000562415 1191 ntBASIC16.78■□□□□ 0.28
CDKL3Q8IVW4 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDKL3Q8IVW4 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
CDKL3Q8IVW4 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDKL3Q8IVW4 CICP6-201ENST00000457191 2729 ntBASIC16.78■□□□□ 0.28
CDKL3Q8IVW4 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDKL3Q8IVW4 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CDKL3Q8IVW4 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDKL3Q8IVW4 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDKL3Q8IVW4 WASH6P-202ENST00000359512 1437 ntBASIC16.78■□□□□ 0.28
CDKL3Q8IVW4 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.78■□□□□ 0.28
CDKL3Q8IVW4 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.78■□□□□ 0.28
CDKL3Q8IVW4 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
CDKL3Q8IVW4 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDKL3Q8IVW4 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.78■□□□□ 0.28
CDKL3Q8IVW4 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.28
CDKL3Q8IVW4 ZNF259P1-201ENST00000407656 1365 ntBASIC16.77■□□□□ 0.28
CDKL3Q8IVW4 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CDKL3Q8IVW4 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDKL3Q8IVW4 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.77■□□□□ 0.28
CDKL3Q8IVW4 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDKL3Q8IVW4 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.77■□□□□ 0.28
CDKL3Q8IVW4 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.77■□□□□ 0.28
CDKL3Q8IVW4 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CDKL3Q8IVW4 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDKL3Q8IVW4 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDKL3Q8IVW4 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDKL3Q8IVW4 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDKL3Q8IVW4 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDKL3Q8IVW4 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.77■□□□□ 0.28
CDKL3Q8IVW4 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDKL3Q8IVW4 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDKL3Q8IVW4 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDKL3Q8IVW4 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDKL3Q8IVW4 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDKL3Q8IVW4 AL590627.1-203ENST00000421194 1026 ntBASIC16.77■□□□□ 0.28
CDKL3Q8IVW4 AC074386.1-202ENST00000463561 864 ntBASIC16.77■□□□□ 0.28
CDKL3Q8IVW4 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.77■□□□□ 0.28
CDKL3Q8IVW4 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CDKL3Q8IVW4 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.77■□□□□ 0.28
CDKL3Q8IVW4 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.77■□□□□ 0.28
CDKL3Q8IVW4 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.77■□□□□ 0.28
CDKL3Q8IVW4 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.77■□□□□ 0.28
CDKL3Q8IVW4 AL365330.1-201ENST00000607459 531 ntBASIC16.77■□□□□ 0.28
CDKL3Q8IVW4 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CDKL3Q8IVW4 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.77■□□□□ 0.28
CDKL3Q8IVW4 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CDKL3Q8IVW4 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDKL3Q8IVW4 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CDKL3Q8IVW4 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.77■□□□□ 0.27
CDKL3Q8IVW4 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDKL3Q8IVW4 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CDKL3Q8IVW4 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.77■□□□□ 0.27
CDKL3Q8IVW4 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.77■□□□□ 0.27
CDKL3Q8IVW4 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.77■□□□□ 0.27
CDKL3Q8IVW4 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.77■□□□□ 0.27
CDKL3Q8IVW4 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDKL3Q8IVW4 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDKL3Q8IVW4 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDKL3Q8IVW4 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CDKL3Q8IVW4 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CDKL3Q8IVW4 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDKL3Q8IVW4 AC073439.1-201ENST00000624121 1774 ntBASIC16.77■□□□□ 0.27
CDKL3Q8IVW4 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
CDKL3Q8IVW4 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDKL3Q8IVW4 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms