Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HERC6Q8IVU3 MFF-223ENST00000524634 647 ntTSL 2 BASIC17.58■□□□□ 0.4
HERC6Q8IVU3 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC17.58■□□□□ 0.4
HERC6Q8IVU3 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.58■□□□□ 0.4
HERC6Q8IVU3 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.58■□□□□ 0.4
HERC6Q8IVU3 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.58■□□□□ 0.4
HERC6Q8IVU3 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.58■□□□□ 0.4
HERC6Q8IVU3 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.58■□□□□ 0.4
HERC6Q8IVU3 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
HERC6Q8IVU3 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
HERC6Q8IVU3 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
HERC6Q8IVU3 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
HERC6Q8IVU3 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HERC6Q8IVU3 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HERC6Q8IVU3 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HERC6Q8IVU3 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
HERC6Q8IVU3 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HERC6Q8IVU3 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HERC6Q8IVU3 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.58■□□□□ 0.4
HERC6Q8IVU3 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HERC6Q8IVU3 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HERC6Q8IVU3 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HERC6Q8IVU3 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.57■□□□□ 0.4
HERC6Q8IVU3 AC084018.2-201ENST00000613093 2607 ntBASIC17.57■□□□□ 0.4
HERC6Q8IVU3 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HERC6Q8IVU3 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HERC6Q8IVU3 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.57■□□□□ 0.4
HERC6Q8IVU3 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HERC6Q8IVU3 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HERC6Q8IVU3 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HERC6Q8IVU3 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HERC6Q8IVU3 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HERC6Q8IVU3 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HERC6Q8IVU3 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HERC6Q8IVU3 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HERC6Q8IVU3 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC17.57■□□□□ 0.4
HERC6Q8IVU3 KRT43P-201ENST00000434019 910 ntBASIC17.57■□□□□ 0.4
HERC6Q8IVU3 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC17.57■□□□□ 0.4
HERC6Q8IVU3 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.57■□□□□ 0.4
HERC6Q8IVU3 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.57■□□□□ 0.4
HERC6Q8IVU3 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HERC6Q8IVU3 AC124947.2-201ENST00000547118 1133 ntBASIC17.57■□□□□ 0.4
HERC6Q8IVU3 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17.57■□□□□ 0.4
HERC6Q8IVU3 BTNL10-201ENST00000595971 695 ntBASIC17.57■□□□□ 0.4
HERC6Q8IVU3 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HERC6Q8IVU3 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HERC6Q8IVU3 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HERC6Q8IVU3 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.57■□□□□ 0.4
HERC6Q8IVU3 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.57■□□□□ 0.4
HERC6Q8IVU3 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HERC6Q8IVU3 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
HERC6Q8IVU3 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HERC6Q8IVU3 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
HERC6Q8IVU3 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HERC6Q8IVU3 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HERC6Q8IVU3 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
HERC6Q8IVU3 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
HERC6Q8IVU3 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HERC6Q8IVU3 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HERC6Q8IVU3 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HERC6Q8IVU3 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HERC6Q8IVU3 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HERC6Q8IVU3 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HERC6Q8IVU3 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
HERC6Q8IVU3 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
HERC6Q8IVU3 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
HERC6Q8IVU3 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
HERC6Q8IVU3 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HERC6Q8IVU3 CDC14C-201ENST00000428251 1719 ntBASIC17.56■□□□□ 0.4
HERC6Q8IVU3 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HERC6Q8IVU3 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.56■□□□□ 0.4
HERC6Q8IVU3 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
HERC6Q8IVU3 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HERC6Q8IVU3 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
HERC6Q8IVU3 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.56■□□□□ 0.4
HERC6Q8IVU3 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HERC6Q8IVU3 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
HERC6Q8IVU3 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HERC6Q8IVU3 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
HERC6Q8IVU3 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HERC6Q8IVU3 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.56■□□□□ 0.4
HERC6Q8IVU3 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HERC6Q8IVU3 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.56■□□□□ 0.4
HERC6Q8IVU3 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
HERC6Q8IVU3 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.56■□□□□ 0.4
HERC6Q8IVU3 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
HERC6Q8IVU3 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC17.56■□□□□ 0.4
HERC6Q8IVU3 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.56■□□□□ 0.4
HERC6Q8IVU3 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HERC6Q8IVU3 PIGL-212ENST00000581006 554 ntTSL 4 BASIC17.56■□□□□ 0.4
HERC6Q8IVU3 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
HERC6Q8IVU3 AC010319.3-201ENST00000597028 470 ntBASIC17.56■□□□□ 0.4
HERC6Q8IVU3 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
HERC6Q8IVU3 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HERC6Q8IVU3 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.56■□□□□ 0.4
HERC6Q8IVU3 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
HERC6Q8IVU3 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HERC6Q8IVU3 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
HERC6Q8IVU3 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HERC6Q8IVU3 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms