Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.5□□□□□ -0.09
LINC00346Q8IVM7 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
LINC00346Q8IVM7 PRAL-201ENST00000624952 3286 ntBASIC14.5□□□□□ -0.09
LINC00346Q8IVM7 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
LINC00346Q8IVM7 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00346Q8IVM7 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00346Q8IVM7 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
LINC00346Q8IVM7 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00346Q8IVM7 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00346Q8IVM7 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00346Q8IVM7 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
LINC00346Q8IVM7 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00346Q8IVM7 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.5□□□□□ -0.09
LINC00346Q8IVM7 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00346Q8IVM7 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00346Q8IVM7 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00346Q8IVM7 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00346Q8IVM7 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LINC00346Q8IVM7 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00346Q8IVM7 AC104109.2-201ENST00000602919 1418 ntBASIC14.49□□□□□ -0.09
LINC00346Q8IVM7 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00346Q8IVM7 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.49□□□□□ -0.09
LINC00346Q8IVM7 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.49□□□□□ -0.09
LINC00346Q8IVM7 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.49□□□□□ -0.09
LINC00346Q8IVM7 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00346Q8IVM7 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.49□□□□□ -0.09
LINC00346Q8IVM7 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
LINC00346Q8IVM7 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00346Q8IVM7 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00346Q8IVM7 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
LINC00346Q8IVM7 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00346Q8IVM7 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00346Q8IVM7 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.49□□□□□ -0.09
LINC00346Q8IVM7 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00346Q8IVM7 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00346Q8IVM7 PMS2P4-201ENST00000412466 1052 ntBASIC14.49□□□□□ -0.09
LINC00346Q8IVM7 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.49□□□□□ -0.09
LINC00346Q8IVM7 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.49□□□□□ -0.09
LINC00346Q8IVM7 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00346Q8IVM7 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.49□□□□□ -0.09
LINC00346Q8IVM7 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.49□□□□□ -0.09
LINC00346Q8IVM7 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.49□□□□□ -0.09
LINC00346Q8IVM7 AC096734.2-201ENST00000562054 433 ntBASIC14.49□□□□□ -0.09
LINC00346Q8IVM7 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.49□□□□□ -0.09
LINC00346Q8IVM7 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.49□□□□□ -0.09
LINC00346Q8IVM7 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
LINC00346Q8IVM7 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
LINC00346Q8IVM7 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00346Q8IVM7 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.49□□□□□ -0.09
LINC00346Q8IVM7 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00346Q8IVM7 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00346Q8IVM7 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00346Q8IVM7 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00346Q8IVM7 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.49□□□□□ -0.09
LINC00346Q8IVM7 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.49□□□□□ -0.09
LINC00346Q8IVM7 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00346Q8IVM7 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.49□□□□□ -0.09
LINC00346Q8IVM7 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00346Q8IVM7 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
LINC00346Q8IVM7 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00346Q8IVM7 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00346Q8IVM7 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.49□□□□□ -0.09
LINC00346Q8IVM7 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00346Q8IVM7 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.49□□□□□ -0.09
LINC00346Q8IVM7 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
LINC00346Q8IVM7 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LINC00346Q8IVM7 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.48□□□□□ -0.09
LINC00346Q8IVM7 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00346Q8IVM7 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
LINC00346Q8IVM7 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00346Q8IVM7 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.48□□□□□ -0.09
LINC00346Q8IVM7 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00346Q8IVM7 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.48□□□□□ -0.09
LINC00346Q8IVM7 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00346Q8IVM7 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
LINC00346Q8IVM7 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00346Q8IVM7 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.48□□□□□ -0.09
LINC00346Q8IVM7 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.48□□□□□ -0.09
LINC00346Q8IVM7 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.48□□□□□ -0.09
LINC00346Q8IVM7 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00346Q8IVM7 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00346Q8IVM7 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00346Q8IVM7 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
LINC00346Q8IVM7 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
LINC00346Q8IVM7 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
LINC00346Q8IVM7 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.48□□□□□ -0.09
LINC00346Q8IVM7 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00346Q8IVM7 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.48□□□□□ -0.09
LINC00346Q8IVM7 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.48□□□□□ -0.09
LINC00346Q8IVM7 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.48□□□□□ -0.09
LINC00346Q8IVM7 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00346Q8IVM7 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.48□□□□□ -0.09
LINC00346Q8IVM7 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.48□□□□□ -0.09
LINC00346Q8IVM7 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00346Q8IVM7 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.48□□□□□ -0.09
LINC00346Q8IVM7 AC023141.13-201ENST00000604991 943 ntBASIC14.48□□□□□ -0.09
LINC00346Q8IVM7 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LINC00346Q8IVM7 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.48□□□□□ -0.09
LINC00346Q8IVM7 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.48□□□□□ -0.09
LINC00346Q8IVM7 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms