Protein–RNA interactions for Protein: Q8IV77

CNGA4, Cyclic nucleotide-gated cation channel alpha-4, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA4Q8IV77 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CNGA4Q8IV77 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CNGA4Q8IV77 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CNGA4Q8IV77 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CNGA4Q8IV77 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CNGA4Q8IV77 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.76■□□□□ 0.43
CNGA4Q8IV77 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNGA4Q8IV77 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNGA4Q8IV77 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNGA4Q8IV77 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC17.76■□□□□ 0.43
CNGA4Q8IV77 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNGA4Q8IV77 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNGA4Q8IV77 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNGA4Q8IV77 TMBIM7P-203ENST00000641617 1718 ntBASIC17.76■□□□□ 0.43
CNGA4Q8IV77 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNGA4Q8IV77 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.76■□□□□ 0.43
CNGA4Q8IV77 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CNGA4Q8IV77 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNGA4Q8IV77 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.76■□□□□ 0.43
CNGA4Q8IV77 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.76■□□□□ 0.43
CNGA4Q8IV77 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.76■□□□□ 0.43
CNGA4Q8IV77 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CNGA4Q8IV77 AC091076.1-201ENST00000610741 619 ntBASIC17.76■□□□□ 0.43
CNGA4Q8IV77 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.76■□□□□ 0.43
CNGA4Q8IV77 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.76■□□□□ 0.43
CNGA4Q8IV77 AC107918.4-202ENST00000641623 219 ntBASIC17.76■□□□□ 0.43
CNGA4Q8IV77 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC17.76■□□□□ 0.43
CNGA4Q8IV77 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNGA4Q8IV77 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.76■□□□□ 0.43
CNGA4Q8IV77 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.76■□□□□ 0.43
CNGA4Q8IV77 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNGA4Q8IV77 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CNGA4Q8IV77 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNGA4Q8IV77 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CNGA4Q8IV77 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNGA4Q8IV77 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNGA4Q8IV77 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNGA4Q8IV77 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNGA4Q8IV77 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNGA4Q8IV77 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNGA4Q8IV77 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.75■□□□□ 0.43
CNGA4Q8IV77 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNGA4Q8IV77 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNGA4Q8IV77 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CNGA4Q8IV77 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CNGA4Q8IV77 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNGA4Q8IV77 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNGA4Q8IV77 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CNGA4Q8IV77 AC136621.1-201ENST00000624017 2304 ntBASIC17.75■□□□□ 0.43
CNGA4Q8IV77 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNGA4Q8IV77 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNGA4Q8IV77 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNGA4Q8IV77 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CNGA4Q8IV77 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNGA4Q8IV77 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNGA4Q8IV77 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.75■□□□□ 0.43
CNGA4Q8IV77 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.75■□□□□ 0.43
CNGA4Q8IV77 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.75■□□□□ 0.43
CNGA4Q8IV77 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.75■□□□□ 0.43
CNGA4Q8IV77 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.75■□□□□ 0.43
CNGA4Q8IV77 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.75■□□□□ 0.43
CNGA4Q8IV77 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.75■□□□□ 0.43
CNGA4Q8IV77 AC021097.1-201ENST00000607902 574 ntBASIC17.75■□□□□ 0.43
CNGA4Q8IV77 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.75■□□□□ 0.43
CNGA4Q8IV77 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CNGA4Q8IV77 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.75■□□□□ 0.43
CNGA4Q8IV77 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17.75■□□□□ 0.43
CNGA4Q8IV77 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNGA4Q8IV77 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CNGA4Q8IV77 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CNGA4Q8IV77 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CNGA4Q8IV77 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNGA4Q8IV77 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CNGA4Q8IV77 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.75■□□□□ 0.43
CNGA4Q8IV77 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.75■□□□□ 0.43
CNGA4Q8IV77 AP003680.1-201ENST00000598970 3660 ntBASIC17.75■□□□□ 0.43
CNGA4Q8IV77 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CNGA4Q8IV77 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNGA4Q8IV77 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNGA4Q8IV77 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CNGA4Q8IV77 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNGA4Q8IV77 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNGA4Q8IV77 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.74■□□□□ 0.43
CNGA4Q8IV77 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNGA4Q8IV77 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.74■□□□□ 0.43
CNGA4Q8IV77 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNGA4Q8IV77 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNGA4Q8IV77 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.74■□□□□ 0.43
CNGA4Q8IV77 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC17.74■□□□□ 0.43
CNGA4Q8IV77 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CNGA4Q8IV77 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.74■□□□□ 0.43
CNGA4Q8IV77 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
CNGA4Q8IV77 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CNGA4Q8IV77 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.74■□□□□ 0.43
CNGA4Q8IV77 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.74■□□□□ 0.43
CNGA4Q8IV77 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CNGA4Q8IV77 KRT18P27-201ENST00000427733 1299 ntBASIC17.74■□□□□ 0.43
CNGA4Q8IV77 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.74■□□□□ 0.43
CNGA4Q8IV77 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.74■□□□□ 0.43
CNGA4Q8IV77 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms