Protein–RNA interactions for Protein: Q86V81

ALYREF, THO complex subunit 4, humanhuman

Known RBP Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREFQ86V81 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.15■□□□□ 0.34
ALYREFQ86V81 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
ALYREFQ86V81 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
ALYREFQ86V81 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ALYREFQ86V81 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.15■□□□□ 0.34
ALYREFQ86V81 KRT18P65-201ENST00000439811 1286 ntBASIC17.15■□□□□ 0.34
ALYREFQ86V81 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.15■□□□□ 0.34
ALYREFQ86V81 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ALYREFQ86V81 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ALYREFQ86V81 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ALYREFQ86V81 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
ALYREFQ86V81 AL135744.1-201ENST00000565098 629 ntBASIC17.15■□□□□ 0.34
ALYREFQ86V81 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.15■□□□□ 0.34
ALYREFQ86V81 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC17.15■□□□□ 0.34
ALYREFQ86V81 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.15■□□□□ 0.34
ALYREFQ86V81 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ALYREFQ86V81 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ALYREFQ86V81 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ALYREFQ86V81 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.15■□□□□ 0.34
ALYREFQ86V81 LINC02012-201ENST00000608206 1725 ntBASIC17.15■□□□□ 0.34
ALYREFQ86V81 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ALYREFQ86V81 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ALYREFQ86V81 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.15■□□□□ 0.34
ALYREFQ86V81 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ALYREFQ86V81 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ALYREFQ86V81 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ALYREFQ86V81 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
ALYREFQ86V81 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.14■□□□□ 0.34
ALYREFQ86V81 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
ALYREFQ86V81 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
ALYREFQ86V81 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ALYREFQ86V81 MIR1908-201ENST00000410394 80 ntBASIC17.14■□□□□ 0.33
ALYREFQ86V81 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.14■□□□□ 0.33
ALYREFQ86V81 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ALYREFQ86V81 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.14■□□□□ 0.33
ALYREFQ86V81 AC099548.2-209ENST00000480264 625 ntBASIC17.14■□□□□ 0.33
ALYREFQ86V81 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ALYREFQ86V81 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.14■□□□□ 0.33
ALYREFQ86V81 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.14■□□□□ 0.33
ALYREFQ86V81 AC073592.8-201ENST00000624126 511 ntBASIC17.14■□□□□ 0.33
ALYREFQ86V81 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
ALYREFQ86V81 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ALYREFQ86V81 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ALYREFQ86V81 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ALYREFQ86V81 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC17.14■□□□□ 0.33
ALYREFQ86V81 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ALYREFQ86V81 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.14■□□□□ 0.33
ALYREFQ86V81 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.14■□□□□ 0.33
ALYREFQ86V81 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ALYREFQ86V81 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ALYREFQ86V81 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ALYREFQ86V81 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.14■□□□□ 0.33
ALYREFQ86V81 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ALYREFQ86V81 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.13■□□□□ 0.33
ALYREFQ86V81 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ALYREFQ86V81 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ALYREFQ86V81 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ALYREFQ86V81 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ALYREFQ86V81 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
ALYREFQ86V81 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ALYREFQ86V81 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.13■□□□□ 0.33
ALYREFQ86V81 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
ALYREFQ86V81 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.13■□□□□ 0.33
ALYREFQ86V81 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ALYREFQ86V81 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
ALYREFQ86V81 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
ALYREFQ86V81 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
ALYREFQ86V81 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
ALYREFQ86V81 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ALYREFQ86V81 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.13■□□□□ 0.33
ALYREFQ86V81 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.13■□□□□ 0.33
ALYREFQ86V81 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ALYREFQ86V81 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ALYREFQ86V81 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ALYREFQ86V81 SPCS2P4-201ENST00000436160 681 ntBASIC17.13■□□□□ 0.33
ALYREFQ86V81 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
ALYREFQ86V81 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.13■□□□□ 0.33
ALYREFQ86V81 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.13■□□□□ 0.33
ALYREFQ86V81 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.13■□□□□ 0.33
ALYREFQ86V81 AC122714.2-201ENST00000502787 707 ntBASIC17.13■□□□□ 0.33
ALYREFQ86V81 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.13■□□□□ 0.33
ALYREFQ86V81 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.13■□□□□ 0.33
ALYREFQ86V81 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.13■□□□□ 0.33
ALYREFQ86V81 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.13■□□□□ 0.33
ALYREFQ86V81 AL139099.5-201ENST00000635274 300 ntBASIC17.13■□□□□ 0.33
ALYREFQ86V81 AC006538.1-201ENST00000567905 1585 ntBASIC17.13■□□□□ 0.33
ALYREFQ86V81 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.13■□□□□ 0.33
ALYREFQ86V81 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ALYREFQ86V81 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
ALYREFQ86V81 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ALYREFQ86V81 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.13■□□□□ 0.33
ALYREFQ86V81 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ALYREFQ86V81 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
ALYREFQ86V81 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ALYREFQ86V81 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ALYREFQ86V81 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.12■□□□□ 0.33
ALYREFQ86V81 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.12■□□□□ 0.33
ALYREFQ86V81 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ALYREFQ86V81 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ALYREFQ86V81 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms