Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SHFQ7M4L6 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.82□□□□□ -0.04
SHFQ7M4L6 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.82□□□□□ -0.04
SHFQ7M4L6 NT5C-211ENST00000582170 653 ntTSL 3 BASIC14.82□□□□□ -0.04
SHFQ7M4L6 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.82□□□□□ -0.04
SHFQ7M4L6 LINC01711-201ENST00000598340 967 ntBASIC14.82□□□□□ -0.04
SHFQ7M4L6 AC008608.2-201ENST00000606089 416 ntBASIC14.82□□□□□ -0.04
SHFQ7M4L6 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC14.82□□□□□ -0.04
SHFQ7M4L6 AC126755.1-201ENST00000525846 6405 ntBASIC14.82□□□□□ -0.04
SHFQ7M4L6 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHFQ7M4L6 PI4KAP1-204ENST00000612579 1703 ntBASIC14.82□□□□□ -0.04
SHFQ7M4L6 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHFQ7M4L6 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SHFQ7M4L6 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.82□□□□□ -0.04
SHFQ7M4L6 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SHFQ7M4L6 TNRC18P2-201ENST00000417666 2714 ntBASIC14.82□□□□□ -0.04
SHFQ7M4L6 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.82□□□□□ -0.04
SHFQ7M4L6 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SHFQ7M4L6 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHFQ7M4L6 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHFQ7M4L6 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SHFQ7M4L6 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SHFQ7M4L6 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
SHFQ7M4L6 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHFQ7M4L6 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHFQ7M4L6 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHFQ7M4L6 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.82□□□□□ -0.04
SHFQ7M4L6 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.82□□□□□ -0.04
SHFQ7M4L6 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.82□□□□□ -0.04
SHFQ7M4L6 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SHFQ7M4L6 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
SHFQ7M4L6 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
SHFQ7M4L6 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.81□□□□□ -0.04
SHFQ7M4L6 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SHFQ7M4L6 AC067930.6-201ENST00000623257 4947 ntBASIC14.81□□□□□ -0.04
SHFQ7M4L6 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHFQ7M4L6 SLC22A20-204ENST00000530038 1673 ntBASIC14.81□□□□□ -0.04
SHFQ7M4L6 LINC01144-201ENST00000626198 1710 ntBASIC14.81□□□□□ -0.04
SHFQ7M4L6 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
SHFQ7M4L6 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHFQ7M4L6 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
SHFQ7M4L6 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHFQ7M4L6 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SHFQ7M4L6 AC068587.6-202ENST00000641839 5619 ntBASIC14.81□□□□□ -0.04
SHFQ7M4L6 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHFQ7M4L6 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SHFQ7M4L6 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.81□□□□□ -0.04
SHFQ7M4L6 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.81□□□□□ -0.04
SHFQ7M4L6 FGFR3P6-201ENST00000457012 610 ntBASIC14.81□□□□□ -0.04
SHFQ7M4L6 POU5F1P6-201ENST00000466990 990 ntBASIC14.81□□□□□ -0.04
SHFQ7M4L6 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.81□□□□□ -0.04
SHFQ7M4L6 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.81□□□□□ -0.04
SHFQ7M4L6 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.81□□□□□ -0.04
SHFQ7M4L6 AC091304.2-201ENST00000564639 760 ntBASIC14.81□□□□□ -0.04
SHFQ7M4L6 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.81□□□□□ -0.04
SHFQ7M4L6 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC14.81□□□□□ -0.04
SHFQ7M4L6 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.81□□□□□ -0.04
SHFQ7M4L6 AC006557.2-201ENST00000592985 1240 ntBASIC14.81□□□□□ -0.04
SHFQ7M4L6 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHFQ7M4L6 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SHFQ7M4L6 REXO1L3P-201ENST00000622202 1288 ntBASIC14.81□□□□□ -0.04
SHFQ7M4L6 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.81□□□□□ -0.04
SHFQ7M4L6 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHFQ7M4L6 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
SHFQ7M4L6 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHFQ7M4L6 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.81□□□□□ -0.04
SHFQ7M4L6 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
SHFQ7M4L6 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHFQ7M4L6 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SHFQ7M4L6 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHFQ7M4L6 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SHFQ7M4L6 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.81□□□□□ -0.04
SHFQ7M4L6 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHFQ7M4L6 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SHFQ7M4L6 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SHFQ7M4L6 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SHFQ7M4L6 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHFQ7M4L6 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SHFQ7M4L6 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
SHFQ7M4L6 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
SHFQ7M4L6 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHFQ7M4L6 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHFQ7M4L6 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.81□□□□□ -0.04
SHFQ7M4L6 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SHFQ7M4L6 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SHFQ7M4L6 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.8□□□□□ -0.04
SHFQ7M4L6 AC069224.1-201ENST00000566372 1715 ntBASIC14.8□□□□□ -0.04
SHFQ7M4L6 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SHFQ7M4L6 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SHFQ7M4L6 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.8□□□□□ -0.04
SHFQ7M4L6 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SHFQ7M4L6 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.8□□□□□ -0.04
SHFQ7M4L6 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHFQ7M4L6 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
SHFQ7M4L6 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SHFQ7M4L6 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
SHFQ7M4L6 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHFQ7M4L6 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.8□□□□□ -0.04
SHFQ7M4L6 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHFQ7M4L6 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms