Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC13.36□□□□□ -0.27
VPS13CQ709C8 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.36□□□□□ -0.27
VPS13CQ709C8 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.36□□□□□ -0.27
VPS13CQ709C8 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC13.36□□□□□ -0.27
VPS13CQ709C8 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.36□□□□□ -0.27
VPS13CQ709C8 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC13.36□□□□□ -0.27
VPS13CQ709C8 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
VPS13CQ709C8 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VPS13CQ709C8 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.36□□□□□ -0.27
VPS13CQ709C8 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
VPS13CQ709C8 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.36□□□□□ -0.27
VPS13CQ709C8 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VPS13CQ709C8 INTS4P2-202ENST00000614726 2019 ntBASIC13.35□□□□□ -0.27
VPS13CQ709C8 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
VPS13CQ709C8 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.35□□□□□ -0.27
VPS13CQ709C8 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
VPS13CQ709C8 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.35□□□□□ -0.27
VPS13CQ709C8 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
VPS13CQ709C8 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
VPS13CQ709C8 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
VPS13CQ709C8 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC13.35□□□□□ -0.27
VPS13CQ709C8 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VPS13CQ709C8 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
VPS13CQ709C8 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC13.35□□□□□ -0.27
VPS13CQ709C8 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
VPS13CQ709C8 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
VPS13CQ709C8 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VPS13CQ709C8 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
VPS13CQ709C8 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
VPS13CQ709C8 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
VPS13CQ709C8 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
VPS13CQ709C8 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.35□□□□□ -0.27
VPS13CQ709C8 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
VPS13CQ709C8 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
VPS13CQ709C8 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.35□□□□□ -0.27
VPS13CQ709C8 MIR6069-201ENST00000620069 79 ntBASIC13.35□□□□□ -0.27
VPS13CQ709C8 AC008687.7-202ENST00000637404 953 ntBASIC13.35□□□□□ -0.27
VPS13CQ709C8 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VPS13CQ709C8 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
VPS13CQ709C8 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
VPS13CQ709C8 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
VPS13CQ709C8 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC13.35□□□□□ -0.27
VPS13CQ709C8 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.35□□□□□ -0.27
VPS13CQ709C8 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
VPS13CQ709C8 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
VPS13CQ709C8 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
VPS13CQ709C8 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.35□□□□□ -0.27
VPS13CQ709C8 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC13.35□□□□□ -0.27
VPS13CQ709C8 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VPS13CQ709C8 TARDBPP1-201ENST00000442013 1203 ntBASIC13.35□□□□□ -0.27
VPS13CQ709C8 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC13.35□□□□□ -0.27
VPS13CQ709C8 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC13.35□□□□□ -0.27
VPS13CQ709C8 ABBA01031663.1-201ENST00000635630 790 ntBASIC13.35□□□□□ -0.27
VPS13CQ709C8 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
VPS13CQ709C8 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
VPS13CQ709C8 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
VPS13CQ709C8 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC13.34□□□□□ -0.27
VPS13CQ709C8 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
VPS13CQ709C8 LBH-202ENST00000401506 485 ntTSL 3 BASIC13.34□□□□□ -0.27
VPS13CQ709C8 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC13.34□□□□□ -0.27
VPS13CQ709C8 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.34□□□□□ -0.27
VPS13CQ709C8 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.34□□□□□ -0.27
VPS13CQ709C8 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VPS13CQ709C8 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC13.34□□□□□ -0.27
VPS13CQ709C8 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VPS13CQ709C8 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.34□□□□□ -0.27
VPS13CQ709C8 AC010328.2-201ENST00000597698 1111 ntBASIC13.34□□□□□ -0.27
VPS13CQ709C8 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
VPS13CQ709C8 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC13.34□□□□□ -0.27
VPS13CQ709C8 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VPS13CQ709C8 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VPS13CQ709C8 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC13.34□□□□□ -0.27
VPS13CQ709C8 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VPS13CQ709C8 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.34□□□□□ -0.27
VPS13CQ709C8 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VPS13CQ709C8 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VPS13CQ709C8 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VPS13CQ709C8 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
VPS13CQ709C8 HINT2P1-201ENST00000419438 481 ntBASIC13.34□□□□□ -0.27
VPS13CQ709C8 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.34□□□□□ -0.27
VPS13CQ709C8 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC13.34□□□□□ -0.27
VPS13CQ709C8 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC13.34□□□□□ -0.27
VPS13CQ709C8 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
VPS13CQ709C8 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.34□□□□□ -0.27
VPS13CQ709C8 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VPS13CQ709C8 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC13.34□□□□□ -0.27
VPS13CQ709C8 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VPS13CQ709C8 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
VPS13CQ709C8 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VPS13CQ709C8 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
VPS13CQ709C8 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
VPS13CQ709C8 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VPS13CQ709C8 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.34□□□□□ -0.27
VPS13CQ709C8 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
VPS13CQ709C8 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.34□□□□□ -0.27
VPS13CQ709C8 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VPS13CQ709C8 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VPS13CQ709C8 RPL13P2-201ENST00000440687 659 ntBASIC13.34□□□□□ -0.27
VPS13CQ709C8 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.34□□□□□ -0.27
VPS13CQ709C8 SPCS2P2-201ENST00000603270 608 ntBASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms