Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TMEM53Q6P2H8 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.08■□□□□ 0
TMEM53Q6P2H8 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
TMEM53Q6P2H8 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TMEM53Q6P2H8 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC15.08■□□□□ 0
TMEM53Q6P2H8 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
TMEM53Q6P2H8 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.08■□□□□ 0
TMEM53Q6P2H8 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
TMEM53Q6P2H8 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
TMEM53Q6P2H8 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TMEM53Q6P2H8 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TMEM53Q6P2H8 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TMEM53Q6P2H8 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.08■□□□□ 0
TMEM53Q6P2H8 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
TMEM53Q6P2H8 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TMEM53Q6P2H8 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TMEM53Q6P2H8 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.08■□□□□ 0
TMEM53Q6P2H8 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.08■□□□□ 0
TMEM53Q6P2H8 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.08■□□□□ 0
TMEM53Q6P2H8 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0
TMEM53Q6P2H8 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TMEM53Q6P2H8 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.08■□□□□ 0
TMEM53Q6P2H8 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
TMEM53Q6P2H8 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TMEM53Q6P2H8 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TMEM53Q6P2H8 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.07■□□□□ 0
TMEM53Q6P2H8 AC005915.1-201ENST00000624912 2018 ntBASIC15.07■□□□□ 0
TMEM53Q6P2H8 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TMEM53Q6P2H8 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.07■□□□□ 0
TMEM53Q6P2H8 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TMEM53Q6P2H8 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
TMEM53Q6P2H8 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TMEM53Q6P2H8 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
TMEM53Q6P2H8 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TMEM53Q6P2H8 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.07■□□□□ 0
TMEM53Q6P2H8 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TMEM53Q6P2H8 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.07■□□□□ 0
TMEM53Q6P2H8 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TMEM53Q6P2H8 RPS2P28-201ENST00000314255 741 ntBASIC15.07■□□□□ 0
TMEM53Q6P2H8 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.07■□□□□ 0
TMEM53Q6P2H8 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.07■□□□□ 0
TMEM53Q6P2H8 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TMEM53Q6P2H8 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.07■□□□□ 0
TMEM53Q6P2H8 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.07■□□□□ 0
TMEM53Q6P2H8 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.07■□□□□ 0
TMEM53Q6P2H8 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.07■□□□□ 0
TMEM53Q6P2H8 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.07■□□□□ 0
TMEM53Q6P2H8 AC021087.4-201ENST00000563761 564 ntBASIC15.07■□□□□ 0
TMEM53Q6P2H8 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.07■□□□□ 0
TMEM53Q6P2H8 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.07■□□□□ 0
TMEM53Q6P2H8 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
TMEM53Q6P2H8 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
TMEM53Q6P2H8 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.07■□□□□ 0
TMEM53Q6P2H8 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
TMEM53Q6P2H8 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TMEM53Q6P2H8 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
TMEM53Q6P2H8 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.07■□□□□ 0
TMEM53Q6P2H8 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
TMEM53Q6P2H8 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.07■□□□□ 0
TMEM53Q6P2H8 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TMEM53Q6P2H8 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TMEM53Q6P2H8 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
TMEM53Q6P2H8 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.06■□□□□ 0
TMEM53Q6P2H8 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.06■□□□□ 0
TMEM53Q6P2H8 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TMEM53Q6P2H8 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TMEM53Q6P2H8 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.06■□□□□ 0
TMEM53Q6P2H8 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.06■□□□□ 0
TMEM53Q6P2H8 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
TMEM53Q6P2H8 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
TMEM53Q6P2H8 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
TMEM53Q6P2H8 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TMEM53Q6P2H8 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
TMEM53Q6P2H8 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TMEM53Q6P2H8 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
TMEM53Q6P2H8 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TMEM53Q6P2H8 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TMEM53Q6P2H8 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TMEM53Q6P2H8 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.06■□□□□ 0
TMEM53Q6P2H8 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.06■□□□□ 0
TMEM53Q6P2H8 LAGE3P1-201ENST00000425356 484 ntBASIC15.06■□□□□ 0
TMEM53Q6P2H8 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.06■□□□□ 0
TMEM53Q6P2H8 OR7E14P-202ENST00000530490 1290 ntBASIC15.06■□□□□ 0
TMEM53Q6P2H8 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.06■□□□□ 0
TMEM53Q6P2H8 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.06■□□□□ 0
TMEM53Q6P2H8 AC006557.2-201ENST00000592985 1240 ntBASIC15.06■□□□□ 0
TMEM53Q6P2H8 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
TMEM53Q6P2H8 AC013268.4-201ENST00000637413 2228 ntBASIC15.06■□□□□ 0
TMEM53Q6P2H8 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
TMEM53Q6P2H8 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.06■□□□□ 0
TMEM53Q6P2H8 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
TMEM53Q6P2H8 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
TMEM53Q6P2H8 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.06■□□□□ 0
TMEM53Q6P2H8 EGFEM1P-202ENST00000431685 1563 ntBASIC15.06■□□□□ 0
TMEM53Q6P2H8 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
TMEM53Q6P2H8 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.06■□□□□ 0
TMEM53Q6P2H8 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
TMEM53Q6P2H8 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TMEM53Q6P2H8 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
TMEM53Q6P2H8 AC022532.1-201ENST00000624563 1728 ntBASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms