Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
MRPL54Q6P161 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
MRPL54Q6P161 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
MRPL54Q6P161 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC12.38□□□□□ -0.43
MRPL54Q6P161 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC12.38□□□□□ -0.43
MRPL54Q6P161 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
MRPL54Q6P161 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
MRPL54Q6P161 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
MRPL54Q6P161 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
MRPL54Q6P161 POR-201ENST00000394893 2532 ntTSL 5 BASIC12.38□□□□□ -0.43
MRPL54Q6P161 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
MRPL54Q6P161 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
MRPL54Q6P161 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12.38□□□□□ -0.43
MRPL54Q6P161 CICP23-201ENST00000605013 2741 ntBASIC12.38□□□□□ -0.43
MRPL54Q6P161 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
MRPL54Q6P161 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC12.38□□□□□ -0.43
MRPL54Q6P161 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
MRPL54Q6P161 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
MRPL54Q6P161 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
MRPL54Q6P161 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
MRPL54Q6P161 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC12.38□□□□□ -0.43
MRPL54Q6P161 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC12.38□□□□□ -0.43
MRPL54Q6P161 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC12.38□□□□□ -0.43
MRPL54Q6P161 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC12.38□□□□□ -0.43
MRPL54Q6P161 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC12.38□□□□□ -0.43
MRPL54Q6P161 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC12.38□□□□□ -0.43
MRPL54Q6P161 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC12.38□□□□□ -0.43
MRPL54Q6P161 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
MRPL54Q6P161 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
MRPL54Q6P161 AL136038.4-201ENST00000603606 1261 ntBASIC12.38□□□□□ -0.43
MRPL54Q6P161 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC12.38□□□□□ -0.43
MRPL54Q6P161 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
MRPL54Q6P161 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
MRPL54Q6P161 AL391807.1-203ENST00000604392 2365 ntBASIC12.38□□□□□ -0.43
MRPL54Q6P161 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
MRPL54Q6P161 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC12.38□□□□□ -0.43
MRPL54Q6P161 AC117489.1-201ENST00000625169 3217 ntBASIC12.38□□□□□ -0.43
MRPL54Q6P161 COCH-203ENST00000460581 2688 ntTSL 2 BASIC12.38□□□□□ -0.43
MRPL54Q6P161 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
MRPL54Q6P161 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
MRPL54Q6P161 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
MRPL54Q6P161 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC12.38□□□□□ -0.43
MRPL54Q6P161 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
MRPL54Q6P161 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
MRPL54Q6P161 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
MRPL54Q6P161 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
MRPL54Q6P161 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC12.38□□□□□ -0.43
MRPL54Q6P161 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
MRPL54Q6P161 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
MRPL54Q6P161 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
MRPL54Q6P161 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
MRPL54Q6P161 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
MRPL54Q6P161 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
MRPL54Q6P161 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
MRPL54Q6P161 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC12.38□□□□□ -0.43
MRPL54Q6P161 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
MRPL54Q6P161 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC12.37□□□□□ -0.43
MRPL54Q6P161 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
MRPL54Q6P161 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
MRPL54Q6P161 AC079781.5-202ENST00000641784 3743 ntBASIC12.37□□□□□ -0.43
MRPL54Q6P161 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
MRPL54Q6P161 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
MRPL54Q6P161 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC12.37□□□□□ -0.43
MRPL54Q6P161 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
MRPL54Q6P161 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
MRPL54Q6P161 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.37□□□□□ -0.43
MRPL54Q6P161 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.37□□□□□ -0.43
MRPL54Q6P161 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
MRPL54Q6P161 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
MRPL54Q6P161 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC12.37□□□□□ -0.43
MRPL54Q6P161 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC12.37□□□□□ -0.43
MRPL54Q6P161 AC128676.1-201ENST00000454392 318 ntBASIC12.37□□□□□ -0.43
MRPL54Q6P161 AP003733.1-201ENST00000491725 852 ntBASIC12.37□□□□□ -0.43
MRPL54Q6P161 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC12.37□□□□□ -0.43
MRPL54Q6P161 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
MRPL54Q6P161 AC034232.1-201ENST00000506026 1064 ntBASIC12.37□□□□□ -0.43
MRPL54Q6P161 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
MRPL54Q6P161 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC12.37□□□□□ -0.43
MRPL54Q6P161 RPS20-210ENST00000523936 899 ntTSL 2 BASIC12.37□□□□□ -0.43
MRPL54Q6P161 ADM-205ENST00000528544 586 ntTSL 2 BASIC12.37□□□□□ -0.43
MRPL54Q6P161 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC12.37□□□□□ -0.43
MRPL54Q6P161 C2orf69P3-201ENST00000565542 1120 ntBASIC12.37□□□□□ -0.43
MRPL54Q6P161 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC12.37□□□□□ -0.43
MRPL54Q6P161 AC013467.2-201ENST00000605472 835 ntBASIC12.37□□□□□ -0.43
MRPL54Q6P161 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
MRPL54Q6P161 AC092666.2-201ENST00000613287 246 ntBASIC12.37□□□□□ -0.43
MRPL54Q6P161 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.37□□□□□ -0.43
MRPL54Q6P161 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
MRPL54Q6P161 AL353692.3-201ENST00000407031 1396 ntBASIC12.37□□□□□ -0.43
MRPL54Q6P161 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
MRPL54Q6P161 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.37□□□□□ -0.43
MRPL54Q6P161 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
MRPL54Q6P161 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
MRPL54Q6P161 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
MRPL54Q6P161 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
MRPL54Q6P161 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
MRPL54Q6P161 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
MRPL54Q6P161 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
MRPL54Q6P161 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
MRPL54Q6P161 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms